咖啡因介导的从DNA模拟物、DNA和细胞核中分离潜在诱变原:超快光谱研究

Soma Banerjee, S. Pal
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摘要

我们提出了飞秒到纳秒分辨率的咖啡因分子自组装二聚体结构的水溶液溶剂化动力学研究。我们在不同温度下扩展了我们的研究,以探索自组装的结构演变,从而探索二聚体内部的溶剂化动力学。此外,我们报告了一个系统的调查咖啡因诱导解离乙啶(Et)阳离子,从核酸和仿生系统的潜在诱变剂。时间分辨的荧光研究与大量溶液中咖啡因-Et复合物形成驱动dna结合Et解离的机制一致。温度依赖的皮秒分辨研究表明,咖啡因-Et复合物在很宽的温度范围内是稳定的,在正常生理极限之内和之外。结合核磁共振波谱和DLS实验,我们提出了咖啡因- et复合物的分子模型。对取自人口腔内壁的鳞状上皮细胞、A549(肺癌)、A375(人皮肤)、RAW(巨噬细胞)和Vero(非洲绿猴肾上皮)细胞系也进行了咖啡因诱导的全细胞Et提取。有趣的是,咖啡因提取Et的效率已被发现依赖于细胞类型。我们对Et从不同电荷的仿生胶束中分离的稳态和皮秒分辨光谱研究揭示了咖啡因分子进行这种分离的特异性。采用皮秒分辨福斯特共振能量转移(FRET)研究了DNA小槽结合染料Hoeschst 33258 (H258,供体)和Et(受体)在分子水平上对咖啡因的影响。最后,我们的上皮细胞荧光显微图证实了由于咖啡因介导的受体释放,供体和受体之间FRET效率的改变。我们在体外和离体的研究结果为咖啡因作为一种潜在的抗诱变治疗剂的有效性和作用提供了重要的线索
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Caffeine Mediated Dissociation of a Potential Mutagen from DNA Mimetics, DNA and Cellular Nuclei: Ultrafast Spectroscopic Studies
We present femtosecond to nanosecond-resolved studies of the dynamics of aqueous solvation within self-assembled dimeric structure of caffeine molecules. We have extended our studies in various temperatures in order to explore structural evolution of the self assemblies and consequently the dynamics of solvation in the interior of the dimer. Furthermore, we report a systematic investigation of caffeine induced dissociation of ethidium (Et) cation, a potential mutagen from nucleic acids and biomimetic systems. Time-resolved fluorescence studies are consistent with a mechanism where caffeine-Et complex formation in bulk solution drives the dissociation of DNA-bound Et. Temperature dependent picosecond resolved studies show the caffeine-Et complex to be stable over a wide range of temperature, within and beyond the normal physiological limit. A combination of NMR spectroscopy and DLS experiments allowed us to propose a molecular model of caffeine-Et complex. Caffeine induced extraction of Et from whole cells were also performed on squamous epithelial cells collected from the inner lining of the human mouth, A549 (lung carcinoma), A375 (human skin), RAW (macrophage) and Vero (African green monkey kidney epithelium) cell lines. Interestingly, the efficiency of caffeine in extracting Et has been found to be dependent on cell types. Our steady state and picosecond resolved spectroscopic studies on the detachment of Et from various biomimicking micelles of different charges reveal the specificity of caffeine molecule for carrying out such dissociation. The picosecond resolved Forster resonance energy transfer (FRET) studies between a DNA minor groove binder dye Hoeschst 33258 (H258, donor) and Et (acceptor) have been employed to investigate the alteration in their association in presence of caffeine in the molecular level. Finally, our fluorescence micrographs of epithelial cells validate the alteration of FRET efficiency between the donor and the acceptor due to the caffeine mediated release of the latter. Our results both in-vitro as well as ex-vivo provide important clues about efficiency and role of caffeine as a potential anti-mutagenic therapeutic agent
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