萨格勒布指数与天然产物毒性预测相关性的统计比较

Siva Parvathi M., Sujatha D., Sukeerthi T.
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引用次数: 1

摘要

图论在硅工具的开发中有着广泛的应用,它被广泛地用于计算拓扑指数来建立化学/化合物的结构活性关系。然而,萨格勒布指数在天然化合物活性/毒性预测方面的应用需要更多的关注。许多可用的在线工具都使用原子键连通性指数(ABC指数),第一和第二萨格勒布指数。超萨格勒布指数的使用是非常罕见的,使用天然化合物被忽视。在此背景下,计算了三种类型的萨格勒布指数(第一萨格勒布指数、第二萨格勒布指数和超萨格勒布指数)来选择天然产物的化合物,并建立了这些指数与天然化合物的细胞毒性之间的关系。我们从文献中选择了Hela细胞系中选定的天然化合物的IC50值作为细胞毒性的指标。利用R程序对Zagreb指数与活性进行相关性分析,得出所有指标均与所研究化合物的细胞毒性相关的结论。本研究作为证据证明,高萨格勒布指数与所研究的天然化合物的细胞毒性/活性有更多的相关性。使用其他机器学习工具验证这些发现的进一步研究将确立超萨格勒布指数作为预测天然化合物毒性的一种方法的重要性。
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A Statistical Comparison between Zagreb indices for correlation with toxicity predictions of natural products
Graph theory had wide applications in developing in silico tools and it is widely used to calculate topological indices to establish structural activity relations of chemicals/compounds. However, usage of Zagreb indices with respect to natural compounds activity/toxicity prediction needs more attention. Many available online tools are using atom bond connectivity index (ABC Index), first and second Zagreb indices. The usage of the Hyper Zagreb index is very rare and using natural compounds is neglected. In this context, three types of Zagreb indices (first Zagreb index, second Zagreb index and hyper Zagreb index) were calculated to the selected chemical compounds of natural products and the relation between these indices and cytotoxicity of natural compounds were established. We have selected IC50 Values of the selected natural compounds in Hela cell lines as an index for cytotoxicity from the literature. The correlation of Zagreb indices and activity was performed using the R program, and we reached the conclusion that all indices correlate with the cytotoxicity of the studied compounds. This study acts as evidence to prove that, hyper Zagreb index correlates more with the cytotoxicity/activity of the studied natural compounds. Further studies using other Machine Learning tools to verify these findings will establish the importance of the hyper Zagreb index as one method to predict the toxicity of natural compounds.
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