二)在人类人类中对多氯联苯的分析:利用SNPs对基因进行研究和分析

Mohamed Saeed Elhassan Mohamed, Hind AbdelAziz Eln
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引用次数: 0

摘要

背景:BMPR2基因是引起肺动脉高压的编码基因。同时,它在调节细胞的生长成熟中起着重要的作用。A (BMPR2)基因仅含有25个有害snp,本研究对其进行了分析。材料和方法:利用NCBI数据库(网址:/ / www.ncbi.nlm.nih.gov/)and)调查了25个SNP,并使用SIFT、Polyphen- 2、I- Mutant、PROVEAN、PhD- SNP和Project Hope 6种预测工具对其进行了分析,其中76%的SNP预测了Polyphen软件可能造成的损害。I- MUTANT检测的蛋白稳定性和72%的snp有下降趋势。当使用snp和GO时,52%的snp患病。经provan检测,64%的snp是有害的。经GENE MANIA软件预测,共有20个相关基因,14个基因具有相同的蛋白结构域,13个基因表达相似。运用PROJEC HOPE软件对结构在功能上的影响进行预测。结果:25个snp中有8个snp具有相同且显著的结果,从而证实了这一结果。结论:8个snp rs137852744、rs137852745、rs137852746、rs137852749、rs137852750、rs137852750、rs143740797和rs374694591具有高损伤性,可引起肺动脉高压疾病。
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In silico analysis of single nucleotide polymorphism (SNPs) in human [BMPR2] gene: دراسة وتحليل الجين (BMPR2) عن طريق (SNPs) باستخدام برمجيات الحاسب الآلي
Background: (BMPR2) gene is encoded gene and cause pulmonary arterial hypertension. Also, it has major role in regulating the growth the maturation of cells. A (BMPR2) gene contains only 25 SNPs as deleterious SNPs and was analyzed in this study. Material and methods: 25 SNPs investigated using the NCBI database (htt: / / www.ncbi.nlm.nih.gov/)and the SNPs were analyzed using six prediction tools: SIFT, Polyphen- 2, I- Mutant, PROVEAN, PhD- SNP and Project Hope. 76% SNPs predict Probably Damaging by POLYPHEN software. the protein stability checked by I- MUTANT and 72% SNPs trend to decrease effected. when used SNPs & GO 52% SNPs were diseased.64% SNPs were deleterious by PROVEAN. There are 20 associated genes, 14 genes share the same protein domains and 13 genes similar in their expression when predicted by GENE MANIA software. Using PROJEC HOPE software to predict the structural effect in function. Result: eight SNPs of 25 SNPs were sharing the same and significant results, so that leads to confirm this result. Conclusions: eight SNPs, rs137852744, rs137852745, rs137852746, rs137852749, rs137852750, rs137852750, rs143740797and rs374694591 were shown to have highly damaging and cause the pulmonary arterial hypertension disease.
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