分子确保α、β和γα-mangostin作为抑制剂-amilase人类胰腺

M. R. Sohilait, Nelson Gaspersz
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引用次数: 8

摘要

利用分子对接方法对人胰腺α-淀粉酶(HPA)酶与α、β和γ-山竹苷配体的相互作用进行了计算机研究。配体α、β和γ-山药苷通过与酶活性侧残基形成氢和范德华键相互作用。α-山核桃苷配体与Trp59、Gln63、Trp96、Thr163、Thr164、Ala198、His201、Glu233和Asp300等残基形成7个氢键和6个范德华键;β-山芒果苷形成5个氢键和8个范德华键,涉及的残基分别是Gln63、Trp96、Thr163、Thr164、Arg195、Asp197、His201、Glu233、Asp300和His305;γ-山马苷与Trp59、Gln63、Trp96、Thr163、Asp197、Ala198、His201、Glu233和Asp300等残基形成9个氢键和5个范德华键。得到的α、β、γ-山竹苷与HPA的结合亲和力为-7.0;-6.6;-7.4 kcal/mol, RMSD值为1,850;1956;和1811 Å。能形成的氢键数与结合亲合力有关。与α和β-山竹苷相比,γ-山竹苷形成稳定的复合物,结合亲和力较低(RMSD值验证),因此具有作为HPA酶抑制剂的潜在活性。
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Penambatan Molekuler α, β, dan γ-mangostin Sebagai Inhibitor α-amilase Pankreas Manusia
In silico studies on interactions between the human pancreatic α-amylase (HPA) enzyme with α, β, and γ-mangostin ligands has been carried out using the molecular docking method. Ligands α, β, and γ-mangostin interact through the formation of hydrogen and van der waals bonds with residues on the enzyme active side. The α-mangostin ligands form seven hydrogen and six van der waals bonds with residues involved were Trp59, Gln63, Trp96, Thr163, Thr164, Ala198, His201, Glu233, and Asp300; β-mangostin forms five hydrogen and eight van der waals bonds with residues involved were Gln63, Trp96, Thr163, Thr164, Arg195, Asp197, His201, Glu233, Asp300, and His305; while γ-mangostin forms nine hydrogen and five van der waals bonds with residues involved were Trp59, Gln63, Trp96, Thr163, Asp197, Ala198, His201, Glu233, and Asp300. The binding afinity of α, β, and γ-mangostin to the HPA obtained were -7.0; -6.6; and -7.4 kcal/mol with RMSD value were 1,850; 1,956; and 1,811 Å, respectively. The number of hydrogen bonds that can be formed was responsible to the binding affinity. Ligand γ-mangostin has potential activity as an inhibitor of HPA enzyme due to the stable complexes formation with lower binding affinity (validated with RMSD value) when compared to α and β-mangostin.
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