慢性阻塞性肺疾病(COPD)、肺动脉高压(PAH)与2019冠状病毒病(COVID-19)生化过程的相互作用

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2023-06-01 DOI:10.33073/pjm-2023-015
Zhe Tian, Lilan Cen
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引用次数: 0

摘要

肺动脉高压(PAH)和慢性阻塞性肺疾病(COPD)都是2019冠状病毒病(COVID-19)的危险因素。肺损伤和肺血管解剖或功能改变的患者更容易感染。该研究的目的是确定患有COPD或PAH的个体是否受到严重急性呼吸综合征冠状病毒2 (SARS-CoV-2)的协同影响。构建蛋白-蛋白相互作用(PPI)网络和鉴定差异表达基因(DEGs)的数据来源包括GEO数据库中的三个RNA-seq数据集(GSE147507、GSE106986和GSE15197)。然后,发现了mirna、常见deg和转录因子(TF)基因之间的关系。使用基因本体(GO)、京都基因与基因组百科全书(KEGG)等数据库进行功能分析,并预测感染SARS-CoV-2的COPD和PAH患者的抗病毒药物。在三个数据集中发现了11个共同的deg,它们的生物学功能主要富集于控制蛋白质修饰过程,特别是磷酸化。生长因子受体结合反映分子功能。KEGG分析表明,共degs主要激活Ras、PI3K-Akt信号通路,并作用于局灶黏附。NFKB1在TF-miRNA-DEGs协同调节网络中与HSA-miR-942相互作用。对乙酰氨基酚被认为是一种有效的候选药物。COPD和PAH与COVID-19的发展有一定的联系。这项研究可以帮助开发COVID-19疫苗和候选药物,这些疫苗和候选药物可以很好地治疗COVID-19。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Interaction of Biochemical Processes between Chronic Obstructive Pulmonary Disease (COPD), Pulmonary Arterial Hypertension (PAH), and Coronavirus Disease 2019 (COVID-19).

Both pulmonary arterial hypertension (PAH) and chronic obstructive pulmonary disease (COPD) are risk factors for coronavirus disease 2019 (COVID-19). Patients with lung injury and altered pulmonary vascular anatomy or function are more susceptible to infections. The purpose of the study is to ascertain whether individuals with COPD or PAH are affected synergistically by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Data sources for the construction of a protein-protein interaction (PPI) network and the identification of differentially expressed genes (DEGs) included three RNA-seq datasets from the GEO database (GSE147507, GSE106986, and GSE15197). Then, relationships between miRNAs, common DEGs, and transcription factor (TF) genes were discovered. Functional analysis using Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and other databases, as well as the forecasting of antiviral medications for COPD and PAH patients infected with SARS-CoV-2, were also performed. Eleven common DEGs were found in the three datasets, and their biological functions were primarily enriched in the control of protein modification processes, particularly phosphorylation. Growth factor receptor binding reflects molecular function. KEGG analysis indicated that co-DEGs mainly activate Ras, and PI3K-Akt signaling pathways and act on focal adhesions. NFKB1 interacted with HSA-miR-942 in the TF-miRNA-DEGs synergistic regulatory network. Acetaminophen is considered an effective drug candidate. There are some connections between COPD and PAH and the development of COVID-19. This research could aid in developing COVID-19 vaccines and medication candidates that would work well as COVID-19 therapies.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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