Plectin在癌症中的多功能性:一项关于Plectin亚型潜在诊断和预后影响的泛癌分析。

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2023-06-01 DOI:10.1089/omi.2023.0053
Hulya Gundesli, Medi Kori, Kazim Yalcin Arga
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引用次数: 0

摘要

Plectin由PLEC编码,是一种细胞骨架和支架蛋白,具有许多独特的同种异构体,作用于各种细胞功能,如细胞粘附、信号转导、癌细胞侵袭和迁移。虽然plectin在肿瘤细胞中表现出高表达和错定位,但我们对plectin及其同种异构体在肿瘤发生中的生物学意义的了解仍然有限。在这项研究中,我们首先进行了途径富集分析,以确定与凝集素相关的癌症标志蛋白。然后,利用从癌症基因组图谱(TCGA)收集的RNA-seq数据进行泛癌症分析,检测PLEC及其转录异构体的mRNA表达水平,并根据癌症分期评估转录异构体的预后和诊断意义。我们在这里表明,几种组织特异性PLEC亚型在不同的癌症类型和分期中失调,但不是PLEC的表达失调。其中PLEC 1d和PLEC 1f是潜在的候选生物标志物,需要进一步的转化和个性化医学研究。本研究通过揭示在不同癌症阶段作为潜在的早期癌症检测生物标志物的强效plectin亚型,为揭示plectin亚型在癌症发生和进展中的分子机制做出了贡献。重要的是,通过全面的功能研究揭示plectin亚型是如何引导恶性肿瘤和特定癌症类型的,这可能为新的癌症治疗开辟新的途径。
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The Versatility of Plectin in Cancer: A Pan-Cancer Analysis on Potential Diagnostic and Prognostic Impacts of Plectin Isoforms.

Plectin, encoded by PLEC, is a cytoskeletal and scaffold protein with a number of unique isoforms that act on various cellular functions such as cell adhesion, signal transduction, cancer cell invasion, and migration. While plectin has been shown to display high expression and mislocalization in tumor cells, our knowledge of the biological significance of plectin and its isoforms in tumorigenesis remain limited. In this study, we first performed pathway enrichment analysis to identify cancer hallmark proteins associated with plectin. Then, a pan-cancer analysis was performed using RNA-seq data collected from the Cancer Genome Atlas (TCGA) to detect the mRNA expression levels of PLEC and its transcript isoforms, and the prognostic as well as diagnostic significance of the transcript isoforms was evaluated considering cancer stages. We show here that several tissue specific PLEC isoforms are dysregulated in different cancer types and stages but not the expression of PLEC. Among them, PLEC 1d and PLEC 1f are potential biomarker candidates and call for further translational and personalized medicine research. This study makes a contribution as a stride to unravel the molecular mechanisms underpinning plectin isoforms in cancer development and progression by revealing the potent plectin isoforms in different stages of cancer as potential early cancer detection biomarkers. Importantly, uncovering how plectin isoforms guide malignancy and particular cancer types by comprehensive functional studies might open new avenues toward novel cancer therapeutics.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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