利用RGB图像和反向传播神经网络对橄榄果实关键品质性状进行表型分析

IF 7.6 1区 农林科学 Q1 AGRONOMY Plant Phenomics Pub Date : 2023-01-01 DOI:10.34133/plantphenomics.0061
Giuseppe Montanaro, Angelo Petrozza, Laura Rustioni, Francesco Cellini, Vitale Nuzzo
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引用次数: 0

摘要

为了预测橄榄果实中的油和酚浓度,采用反向传播神经网络(BPNNs)和非接触植物表型技术相结合的方法,检索了基于RGB图像的油和酚浓度数字代理。不同成熟时间的品种(×3)的果实被取样(~10天间隔,×2年),拍照并分析酚和油的浓度。在此之前,对水果样品进行拍照,并对图像进行分割,提取红(R)、绿(G)和蓝(B)的平均像素值,这些像素值在35个基于rgb的比色指数中重新排列。设计了三个bpnn作为输入变量(a)原始35个RGB指标,(b)主成分分析(PCA)预处理后的主成分得分,以及(c)稀疏PCA后得到的减少的RGB指标数量(28)。结果表明,在bpnn中,预测的平均R2值最高,分别为0.87 ~ 0.95(油)和0.81 ~ 0.90(酚)。除R2外,还计算了其他性能指标(均方根误差和平均绝对误差),并将其合并为通用性能指标(GPI)。结果表明,可以根据品种的成熟期设计具有特定拓扑结构的BPNN。目前的研究证明,基于rgb的图像表型可以有效地预测橄榄果实的关键质量性状,支持数字农业领域内发展中的橄榄部门。
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Phenotyping Key Fruit Quality Traits in Olive Using RGB Images and Back Propagation Neural Networks.

To predict oil and phenol concentrations in olive fruit, the combination of back propagation neural networks (BPNNs) and contact-less plant phenotyping techniques was employed to retrieve RGB image-based digital proxies of oil and phenol concentrations. Fruits of cultivars (×3) differing in ripening time were sampled (~10-day interval, ×2 years), pictured and analyzed for phenol and oil concentrations. Prior to this, fruit samples were pictured and images were segmented to extract the red (R), green (G), and blue (B) mean pixel values that were rearranged in 35 RGB-based colorimetric indexes. Three BPNNs were designed using as input variables (a) the original 35 RGB indexes, (b) the scores of principal components after a principal component analysis (PCA) pre-processing of those indexes, and (c) a reduced number (28) of the RGB indexes achieved after a sparse PCA. The results show that the predictions reached the highest mean R2 values ranging from 0.87 to 0.95 (oil) and from 0.81 to 0.90 (phenols) across the BPNNs. In addition to the R2, other performance metrics were calculated (root mean squared error and mean absolute error) and combined into a general performance indicator (GPI). The resulting rank of the GPI suggests that a BPNN with a specific topology might be designed for cultivars grouped according to their ripening period. The present study documented that an RGB-based image phenotyping can effectively predict key quality traits in olive fruit supporting the developing olive sector within a digital agriculture domain.

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来源期刊
Plant Phenomics
Plant Phenomics Multiple-
CiteScore
8.60
自引率
9.20%
发文量
26
审稿时长
14 weeks
期刊介绍: Plant Phenomics is an Open Access journal published in affiliation with the State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University (NAU) and published by the American Association for the Advancement of Science (AAAS). Like all partners participating in the Science Partner Journal program, Plant Phenomics is editorially independent from the Science family of journals. The mission of Plant Phenomics is to publish novel research that will advance all aspects of plant phenotyping from the cell to the plant population levels using innovative combinations of sensor systems and data analytics. Plant Phenomics aims also to connect phenomics to other science domains, such as genomics, genetics, physiology, molecular biology, bioinformatics, statistics, mathematics, and computer sciences. Plant Phenomics should thus contribute to advance plant sciences and agriculture/forestry/horticulture by addressing key scientific challenges in the area of plant phenomics. The scope of the journal covers the latest technologies in plant phenotyping for data acquisition, data management, data interpretation, modeling, and their practical applications for crop cultivation, plant breeding, forestry, horticulture, ecology, and other plant-related domains.
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