Dipak P Upadhyaya, Yasir Tarabichi, Katrina Prantzalos, Salman Ayub, David C Kaelber, Satya S Sahoo
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Further, the relative importance of MDW as compared to other routinely available hematologic parameters and vital signs has not been studied, which makes it difficult for resource constrained hospital systems to make informed decisions in this regard. To address this issue, we analyzed data from a cohort of ED patients (n=10,229) admitted to a large regional safety-net hospital in Cleveland, Ohio with suspected infection who later developed poor outcomes associated with sepsis. We developed a new analytical framework consisting of seven data models and an ensemble of high accuracy machine learning (ML) algorithms (accuracy values ranging from 0.83 to 0.90) for the prediction of outcomes more common in sepsis than uncomplicated infection (3-day intensive care unit stay or death). To characterize the contributions of individual hematologic parameters, we applied the Local Interpretable Model-Agnostic Explanation (LIME) and Shapley Additive Value (SHAP) interpretability methods to the high accuracy ML algorithms. The ML interpretability results were consistent in their findings that the value of MDW is grossly attenuated in the presence of other routinely reported hematologic parameters and vital signs data. 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引用次数: 0
摘要
在急诊科(ED)收治的患者中早期发现败血症是一项重要的临床目标,因为早期识别和治疗有助于降低 20% 或更高的发病率和死亡率。脓毒症相关器官功能障碍期间的血液学变化已得到公认,最近美国食品和药物管理局批准了一种名为单核细胞分布宽度(MDW)的脓毒症新生物标志物。然而,量化脓毒症患者单核细胞活化的 MDW 并不是常规报告的参数,它需要专门的专有实验室设备。此外,与其他常规血液学参数和生命体征相比,MDW 的相对重要性尚未得到研究,这使得资源有限的医院系统难以在这方面做出明智的决策。为了解决这个问题,我们分析了俄亥俄州克利夫兰市一家大型地区安全网医院收治的疑似感染的 ED 患者队列(n=10229)的数据,这些患者后来出现了与败血症相关的不良后果。我们开发了一个新的分析框架,该框架由七个数据模型和一组高准确度的机器学习(ML)算法(准确度从 0.83 到 0.90 不等)组成,用于预测脓毒症比无并发症感染更常见的结果(入住重症监护室 3 天或死亡)。为了确定单个血液学参数的贡献,我们对高准确度的 ML 算法采用了局部可解释模型-诊断解释(LIME)和夏普利加值(SHAP)可解释性方法。ML 的可解释性结果一致,即在存在其他常规报告的血液学参数和生命体征数据的情况下,MDW 的价值被严重削弱。此外,这项研究首次表明,在高精度 ML 算法中,全血细胞计数加差值(CBC-DIFF)和生命体征数据可替代 MDW,用于筛查与败血症相关的不良后果。
Machine Learning Interpretability Methods to Characterize the Importance of Hematologic Biomarkers in Prognosticating Patients with Suspected Infection.
Early detection of sepsis in patients admitted to the emergency department (ED) is an important clinical objective as early identification and treatment can help reduce morbidity and mortality rate of 20% or higher. Hematologic changes during sepsis-associated organ dysfunction are well established and a new biomarker called Monocyte Distribution Width (MDW) has been recently approved by the US Food and Drug Administration for sepsis. However, MDW, which quantifies monocyte activation in sepsis patients, is not a routinely reported parameter and it requires specialized proprietary laboratory equipment. Further, the relative importance of MDW as compared to other routinely available hematologic parameters and vital signs has not been studied, which makes it difficult for resource constrained hospital systems to make informed decisions in this regard. To address this issue, we analyzed data from a cohort of ED patients (n=10,229) admitted to a large regional safety-net hospital in Cleveland, Ohio with suspected infection who later developed poor outcomes associated with sepsis. We developed a new analytical framework consisting of seven data models and an ensemble of high accuracy machine learning (ML) algorithms (accuracy values ranging from 0.83 to 0.90) for the prediction of outcomes more common in sepsis than uncomplicated infection (3-day intensive care unit stay or death). To characterize the contributions of individual hematologic parameters, we applied the Local Interpretable Model-Agnostic Explanation (LIME) and Shapley Additive Value (SHAP) interpretability methods to the high accuracy ML algorithms. The ML interpretability results were consistent in their findings that the value of MDW is grossly attenuated in the presence of other routinely reported hematologic parameters and vital signs data. Further, this study for the first time shows that complete blood count with differential (CBC-DIFF) together with vital signs data can be used as a substitute for MDW in high accuracy ML algorithms to screen for poor outcomes associated with sepsis.