建立基于细胞的CYP2C9代谢效率筛选工作流程:朝着个性化医疗中使用呼吸挥发物的方向发展。

IF 3.7 4区 医学 Q1 BIOCHEMICAL RESEARCH METHODS Journal of breath research Pub Date : 2023-07-19 DOI:10.1088/1752-7163/ace46f
Franziska Lochmann, Aleksandar Nikolajevic, Valentina Stock, Sarah Kammerer, Monica L Fernández-Quintero, Johannes R Loeffler, Klaus R Liedl, Jakob Troppmair, Chris A Mayhew, Veronika Ruzsanyi
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引用次数: 0

摘要

使用呼出气体中的挥发性生物标志物作为个体药物反应的预测因子,通过提供酶活性的直接信息,将推动个性化医疗领域的发展。这将为患者和医疗保健部门带来巨大的好处。无创呼吸测试也将获得患者的高度接受。为了实现这一目标,需要确定和量化细胞色素P450 (CYP)家族这一主要药物代谢酶群的广泛多态性所导致的代谢差异。CYP2C9负责代谢许多关键药物(如双氯芬酸)和食品成分(如柠檬烯)。在本文中,我们提供了一项概念验证研究,说明了双氯芬酸在过表达CYP2C9的重组HEK293T细胞中向4'-羟基双氯芬酸的体外生物转化。这种体外方法是发展呼吸测试以确定和监测人体代谢过程的必要和重要的第一步。通过关注双氯芬酸的代谢转化,我们已经能够使用基于细胞的CYP2C9活性系统建立一个工作流程。此外,我们说明了双氯芬酸的生物转化如何在柠檬烯存在下受到限制,柠檬烯是另一种CYP2C9代谢底物。我们表明,增加柠檬烯水平不断减少生产的4'-羟基双氯芬酸。采用Michaelis-Menten动力学对双氯芬酸4′-羟基化反应进行了研究,结果表明,在有和没有柠檬烯的情况下,反应的动力学常数KM分别为103µM和94.1µM,最大反应速率Vmax分别为46.8 pmol min-1106cells-1和56.0 pmol min-1106cells-1,表明双氯芬酸4′-羟基化反应为非竞争性或混合型抑制。柠檬烯抑制4′-羟基双氯芬醚生成的半最大抑制浓度值(IC50)为1413µM。
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Establishing a cell-based screening workflow for determining the efficiency of CYP2C9 metabolism: moving towards the use of breath volatiles in personalised medicine.

The use of volatile biomarkers in exhaled breath as predictors to individual drug response would advance the field of personalised medicine by providing direct information on enzyme activity. This would result in enormous benefits, both for patients and for the healthcare sector. Non-invasive breath tests would also gain a high acceptance by patients. Towards this goal, differences in metabolism resulting from extensive polymorphisms in a major group of drug-metabolizing enzymes, the cytochrome P450 (CYP) family, need to be determined and quantified. CYP2C9 is responsible for metabolising many crucial drugs (e.g., diclofenac) and food ingredients (e.g., limonene). In this paper, we provide a proof-of-concept study that illustrates thein vitrobioconversion of diclofenac in recombinant HEK293T cells overexpressing CYP2C9 to 4'-hydroxydiclofenac. Thisin vitroapproach is a necessary and important first step in the development of breath tests to determine and monitor metabolic processes in the human body. By focusing on the metabolic conversion of diclofenac, we have been able to establish a workflow using a cell-based system for CYP2C9 activity. Furthermore, we illustrate how the bioconversion of diclofenac is limited in the presence of limonene, which is another CYP2C9 metabolising substrate. We show that increasing limonene levels continuously reduce the production of 4'-hydroxydiclofenac. Michaelis-Menten kinetics were performed for the diclofenac 4'-hydroxylation with and without limonene, giving a kinetic constant of the reaction,KM, of 103µM and 94.1µM, respectively, and a maximum reaction rate,Vmax, of 46.8 pmol min-1106cells-1and 56.0 pmol min-1106cells-1with and without the inhibitor, respectively, suggesting a non-competitive or mixed inhibition type. The half-maximal inhibitory concentration value (IC50) for the inhibition of the formation of 4'-hydroxydiclofenace by limonene is determined to be 1413µM.

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来源期刊
Journal of breath research
Journal of breath research BIOCHEMICAL RESEARCH METHODS-RESPIRATORY SYSTEM
CiteScore
7.60
自引率
21.10%
发文量
49
审稿时长
>12 weeks
期刊介绍: Journal of Breath Research is dedicated to all aspects of scientific breath research. The traditional focus is on analysis of volatile compounds and aerosols in exhaled breath for the investigation of exogenous exposures, metabolism, toxicology, health status and the diagnosis of disease and breath odours. The journal also welcomes other breath-related topics. Typical areas of interest include: Big laboratory instrumentation: describing new state-of-the-art analytical instrumentation capable of performing high-resolution discovery and targeted breath research; exploiting complex technologies drawn from other areas of biochemistry and genetics for breath research. Engineering solutions: developing new breath sampling technologies for condensate and aerosols, for chemical and optical sensors, for extraction and sample preparation methods, for automation and standardization, and for multiplex analyses to preserve the breath matrix and facilitating analytical throughput. Measure exhaled constituents (e.g. CO2, acetone, isoprene) as markers of human presence or mitigate such contaminants in enclosed environments. Human and animal in vivo studies: decoding the ''breath exposome'', implementing exposure and intervention studies, performing cross-sectional and case-control research, assaying immune and inflammatory response, and testing mammalian host response to infections and exogenous exposures to develop information directly applicable to systems biology. Studying inhalation toxicology; inhaled breath as a source of internal dose; resultant blood, breath and urinary biomarkers linked to inhalation pathway. Cellular and molecular level in vitro studies. Clinical, pharmacological and forensic applications. Mathematical, statistical and graphical data interpretation.
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