肯德尔传递熵:一种估算复杂系统中信息传递的新方法。

IF 3.7 3区 医学 Q2 ENGINEERING, BIOMEDICAL Journal of neural engineering Pub Date : 2023-07-20 DOI:10.1088/1741-2552/ace5dd
Xin Wen, Zhenhu Liang, Jing Wang, Changwei Wei, Xiaoli Li
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引用次数: 0

摘要

目标。传递熵(TE)已被广泛用于推断动力系统之间的因果关系,特别是在神经科学中。肯德尔变换为估计信息论测度提供了一种新的量化方法,并在小样本神经信号中显示出潜在的优势。但是,由于通常受到小样本量的限制,它尚未被引入到TE估计的框架中。本文旨在将Kendall相关的思想引入到TE估计中,并验证其效果。方法将改进的Kendall变换与TE估计相结合,提出了Kendall TE (KTE)。为了证实其有效性,我们将KTE与两种常见的TE估计技术进行了比较:自适应划分算法(D-V划分)和符号TE。通过线性模型、非线性模型、线性+非线性模型和神经质量模型的仿真实验对其性能进行了评价。此外,KTE还应用于真实脑电图(EEG)记录,以量化异丙酚诱导全身麻醉下额叶和顶叶区域之间的定向连通性。主要的结果。仿真结果表明,KTE方法在许多方面优于其他两种方法:(1)在小样本量下识别耦合方向;(2)对耦合强度的敏感性;(3)抗噪声;(4)对时变耦合变化的敏感性。对于真实的脑电图记录,KTE清晰地检测到异丙酚诱导的无意识中前额到顶叶连接的中断,这与先前的研究结果一致。意义我们揭示了所提出的KTE方法是一种强大的估计TE的工具,特别适用于小样本量。KTE还为信息论测量提供了一种量化连续时间序列的创新形式。
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Kendall transfer entropy: a novel measure for estimating information transfer in complex systems.

Objective.Transfer entropy (TE) has been widely used to infer causal relationships among dynamical systems, especially in neuroscience. Kendall transformation provides a novel quantization method for estimating information-theoretic measures and shows potential advantages for small-sample neural signals. But it has yet to be introduced into the framework of TE estimation, which commonly suffers from the limitation of small sample sizes. This paper aims to introduce the idea of Kendall correlation into TE estimation and verify its effect.Approach.We proposed the Kendall TE (KTE) which combines the improved Kendall transformation and the TE estimation. To confirm its effectiveness, we compared KTE with two common TE estimation techniques: the adaptive partitioning algorithm (D-V partitioning) and the symbolic TE. Their performances were estimated by simulation experiments which included linear, nonlinear, linear + nonlinear models and neural mass models. Moreover, the KTE was also applied to real electroencephalography (EEG) recordings to quantify the directional connectivity between frontal and parietal regions with propofol-induced general anesthesia.Main results.The simulation results showed that the KTE outperformed the other two methods by many measures: (1) identifying the coupling direction under a small sample size; (2) the sensitivity to coupling strength; (3) noise resistance; and (4) the sensitivity to time-dependent coupling changes. For real EEG recordings, the KTE clearly detected the disrupted frontal-to-parietal connectivity in propofol-induced unconsciousness, which is in agreement with previous findings.Significance.We reveal that the proposed KTE method is a robust and powerful tool for estimating TE, and is particularly suitable for small sample sizes. The KTE also provides an innovative form of quantizing continuous time series for information-theoretic measures.

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来源期刊
Journal of neural engineering
Journal of neural engineering 工程技术-工程:生物医学
CiteScore
7.80
自引率
12.50%
发文量
319
审稿时长
4.2 months
期刊介绍: The goal of Journal of Neural Engineering (JNE) is to act as a forum for the interdisciplinary field of neural engineering where neuroscientists, neurobiologists and engineers can publish their work in one periodical that bridges the gap between neuroscience and engineering. The journal publishes articles in the field of neural engineering at the molecular, cellular and systems levels. The scope of the journal encompasses experimental, computational, theoretical, clinical and applied aspects of: Innovative neurotechnology; Brain-machine (computer) interface; Neural interfacing; Bioelectronic medicines; Neuromodulation; Neural prostheses; Neural control; Neuro-rehabilitation; Neurorobotics; Optical neural engineering; Neural circuits: artificial & biological; Neuromorphic engineering; Neural tissue regeneration; Neural signal processing; Theoretical and computational neuroscience; Systems neuroscience; Translational neuroscience; Neuroimaging.
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