A multi-Biclustering Combinatorial Based algorithm

E. Nosova, G. Raiconi, R. Tagliaferri
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引用次数: 1

Abstract

In the last years a large amount of information about genomes was discovered, increasing the complexity of analysis. Therefore the most advanced techniques and algorithms are required. In many cases researchers use unsupervised clustering. But the inability of clustering to solve a number of tasks requires new algorithms. So, recently, scientists turned their attention to the biclustering techniques. In this paper we propose a novel biclustering technique, that we call Combinatorial Biclustering Algorithm (BCA). This technique permits to solve the following problems: 1) classification of data with respect to rows and columns together; 2) discovering of the overlapped biclusters; 3) definition of the minimal number of rows and columns in biclusters; 4) finding all biclusters together. We apply our model to two synthetic and one real biological data sets and show the results.
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一种基于多双聚类的组合算法
在过去的几年里,大量关于基因组的信息被发现,增加了分析的复杂性。因此,需要最先进的技术和算法。在许多情况下,研究人员使用无监督聚类。但是聚类无法解决许多任务需要新的算法。所以,最近,科学家们把注意力转向了双聚类技术。本文提出了一种新的双聚类技术,我们称之为组合双聚类算法(BCA)。该技术允许解决以下问题:1)将数据按行和列进行分类;2)重叠双星团的发现;3)定义双聚类的最小行数和最小列数;4)找到所有的双星团。我们将该模型应用于两个合成数据集和一个真实生物数据集,并展示了结果。
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