Listing Dense Subgraphs in Small Memory

Patricio Pinto, N. Cruces, Cecilia Hernández
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Abstract

Listing relevant patterns from graphs is becoming increasingly challenging as Web and social graphs are growing in size at a great rate. This scenario requires to process information more efficiently, including the need of processing data that cannot fit in main memory. Typical approaches for processing data using limited main memory include the streaming and external memory models. This paper addresses the problem of listing dense sub graphs from Web and social graphs using little memory. We propose an external memory algorithm based on K-way merge-sort for clustering and reordering input graphs. We also propose mining heuristics that work well with different stream orders such as URL, BFS, and cluster-based. Our experimental evaluation shows that on Web graphs, in comparison with the in-memory algorithm, the streaming mining heuristic is able to find between 70 and 96% of edges participating in dense sub graphs, uses only between 17 and 25% of the memory, and running times are between 34 and 65%. We further consider an application that uses these dense sub graphs for compressing Web graphs with a representation that enables querying the collection of sub graphs for pattern recovery and basic statistics without decompression.
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在小内存中列出密集子图
随着Web和社交图表规模的快速增长,从图表中列出相关模式变得越来越具有挑战性。这种情况需要更有效地处理信息,包括需要处理无法装入主存的数据。使用有限的主内存处理数据的典型方法包括流和外部内存模型。本文解决了使用少量内存从Web和社交图中列出密集子图的问题。提出了一种基于K-way归并排序的外部存储算法,用于输入图的聚类和重排序。我们还提出了挖掘启发式方法,可以很好地处理不同的流顺序,如URL、BFS和基于集群的。我们的实验评估表明,在Web图上,与内存算法相比,流挖掘启发式算法能够找到70 - 96%参与密集子图的边,仅使用17 - 25%的内存,运行时间在34 - 65%之间。我们进一步考虑一个应用程序,该应用程序使用这些密集子图来压缩Web图,使用一种表示形式,可以查询子图的集合,以便在不解压缩的情况下进行模式恢复和基本统计。
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