An Image Segment-based Classification for Chest X-Ray Image

Phongsathorn Kittiworapanya, Kitsuchart Pasupa
{"title":"An Image Segment-based Classification for Chest X-Ray Image","authors":"Phongsathorn Kittiworapanya, Kitsuchart Pasupa","doi":"10.1145/3429210.3429227","DOIUrl":null,"url":null,"abstract":"In late 2019, the first case of COVID-19 was confirmed in Wuhan, China. The number of cases has been rapidly growing since then. Molecular and antigen testing methods are very accurate for the diagnosis of COVID-19. However, with sudden increases of infected cases, laboratory-based molecular test and COVID-19 test kits are in short supply. Because the virus affects an infected patient’s lung, interpreting images obtained from Computed Tomography Scanners and Chest X-ray Radiography (CXR) machines can be an alternative for diagnosis. However CXR interpretation requires experts and the number of experts is limited. Therefore, automatic detection of COVID-19 from CXR images is required. We describe a system for automatic detection of COVID-19 from CXR images. It first segmented images to select only the lung. The segmented part was then fed into a multiclass classification module, which worked well with samples obtained from various sources, which had different aspect ratios, contrast and viewpoints. The system also handled the unbalanced dataset—only a small fraction of images showed COVID-19. Our system achieved 92% of F1-score and 88.1% Marco F1-score on the 3rd Deep Learning and AI Summer/Winter School Hackathon Phase 3—Multi-class COVID-19 Chest X-ray challenge public leaderboard.","PeriodicalId":164790,"journal":{"name":"CSBio '20: Proceedings of the Eleventh International Conference on Computational Systems-Biology and Bioinformatics","volume":"39 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2020-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"CSBio '20: Proceedings of the Eleventh International Conference on Computational Systems-Biology and Bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3429210.3429227","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

Abstract

In late 2019, the first case of COVID-19 was confirmed in Wuhan, China. The number of cases has been rapidly growing since then. Molecular and antigen testing methods are very accurate for the diagnosis of COVID-19. However, with sudden increases of infected cases, laboratory-based molecular test and COVID-19 test kits are in short supply. Because the virus affects an infected patient’s lung, interpreting images obtained from Computed Tomography Scanners and Chest X-ray Radiography (CXR) machines can be an alternative for diagnosis. However CXR interpretation requires experts and the number of experts is limited. Therefore, automatic detection of COVID-19 from CXR images is required. We describe a system for automatic detection of COVID-19 from CXR images. It first segmented images to select only the lung. The segmented part was then fed into a multiclass classification module, which worked well with samples obtained from various sources, which had different aspect ratios, contrast and viewpoints. The system also handled the unbalanced dataset—only a small fraction of images showed COVID-19. Our system achieved 92% of F1-score and 88.1% Marco F1-score on the 3rd Deep Learning and AI Summer/Winter School Hackathon Phase 3—Multi-class COVID-19 Chest X-ray challenge public leaderboard.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
基于图像分割的胸部x射线图像分类
2019年底,中国武汉确诊了首例COVID-19病例。自那时以来,病例数量一直在迅速增长。分子和抗原检测方法对COVID-19的诊断非常准确。然而,随着感染病例的突然增加,实验室分子检测和新冠病毒检测试剂盒供不应求。由于病毒会影响受感染患者的肺部,因此解读计算机断层扫描仪和胸部x射线照相(CXR)机获得的图像可作为诊断的替代方法。然而,CXR解释需要专家,而专家的数量有限。因此,需要从CXR图像中自动检测COVID-19。我们描述了一个从CXR图像中自动检测COVID-19的系统。它首先分割图像,只选择肺。然后将分割的部分输入到多类分类模块中,该模块可以很好地处理来自不同长宽比、对比度和视点的各种来源的样本。该系统还处理了不平衡的数据——只有一小部分图像显示了COVID-19。我们的系统在第三届深度学习与人工智能夏冬学校黑客马拉松第三阶段-多班级COVID-19胸部x线挑战公共排行榜上取得了92%的f1得分和88.1%的Marco f1得分。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Predicting Dihydroartemisinin Resistance in Plasmodium falciparum using Pathway Activity Inference An Image Segment-based Classification for Chest X-Ray Image Classification of Protein Crystallization Images using EfficientNet with Data Augmentation Covid 19 Prediction from X Ray Images Using Fully Connected Convolutional Neural Network Uncovering RNA and DNA Modifications from Native Sequences
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1