Proof-of-concept model of red blood cell with coarse-grained hemoglobin

Mariana Ondrusová, I. Cimrák
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Abstract

In modelling of individual red blood cells different bio-mechanical phenomena have to be taken into account. Besides the evident mechanical properties of the red blood cell membrane such as shear elasticity, viscosity ratio is sometimes omitted in the models. We present an approach for including the difference between the inner and the outer fluid of the cell into model. We analyze physical properties of protein hemoglobin that is responsible for higher viscosity of inner cytoplasm of the cell. To keep the computational complexity reasonable we build coarse-grained model of hemoglobin. We present initial proof-of-concept study using the validation test of cell’s behaviour in a shear flow.
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粗粒血红蛋白红细胞的概念验证模型
在对单个红细胞进行建模时,必须考虑到不同的生物力学现象。除了红细胞膜的剪切弹性等明显的力学特性外,黏度比有时在模型中被忽略。我们提出了一种将细胞内液和外液的差异纳入模型的方法。我们分析了蛋白血红蛋白的物理性质,它是细胞内细胞质高粘度的原因。为了保持合理的计算复杂度,我们建立了血红蛋白的粗粒度模型。我们提出了初步的概念验证研究,使用细胞在剪切流动中的行为验证测试。
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