I. Dopido, C. Deniz, H. Fabelo, G. Callicó, S. López, R. Sarmiento, D. Bulters, E. Casselden, H. Bulstrode
{"title":"Decision tree classification system for brain cancer detection using spectrographic samples","authors":"I. Dopido, C. Deniz, H. Fabelo, G. Callicó, S. López, R. Sarmiento, D. Bulters, E. Casselden, H. Bulstrode","doi":"10.1109/DCIS.2015.7388596","DOIUrl":null,"url":null,"abstract":"Hyperspectral imaging is an active research field for remote sensing applications. These images provide a lot of information about the characteristics of the materials due to the high spectral resolution. This work is focused in the use of this kind of information to detect tumour tissue, particularly brain cancer tissue. In recent years, the study of this kind of tumour has been a challenging task due to the nature of these tissues. The neurosurgeon usually finds several problems to detect tumour tissues by the naked eye. In order to address this problem, this work makes use of high spectral resolution samples in the range from 400 nm to 6000 nm, provided by an Agilent Resolutions Pro V.5 spectrometer that has been diagnosed by histopathology. This instrument can sample a single pixel with a very high spectral resolution. The high spectral resolution allows a reliable separation between the different tissues in brain tumour. The proposed approach is based on a hierarchical decision tree. This approach is composed by several systems of Support Vector Machine classifiers. The 225 used samples come from 25 adults (males and females) and have been taken at different surgical procedures at the University Hospital of Southampton. The main goal is to discriminate between tumour tissue and normal tissue. Specifically, it assigns priority to the group of classes known a priori to the classification showed accordingly to the level of detail. The experimental results indicate that the use of the proposed new decision tree approach could be a solution to effectively discriminate between tumour and normal tissue and additionally provide information about the specific tissue for these classes. For our data set, a sensitivity of 100% and a specificity of 99.27% have been obtained when healthy and tumour samples are discriminated. These results clearly indicate that the use of high dimensionality spectral data is a promising and effective technique to indicate if a brain sample is or not affected by cancer with a high reliability.","PeriodicalId":191482,"journal":{"name":"2015 Conference on Design of Circuits and Integrated Systems (DCIS)","volume":"66 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2015-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2015 Conference on Design of Circuits and Integrated Systems (DCIS)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/DCIS.2015.7388596","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2
Abstract
Hyperspectral imaging is an active research field for remote sensing applications. These images provide a lot of information about the characteristics of the materials due to the high spectral resolution. This work is focused in the use of this kind of information to detect tumour tissue, particularly brain cancer tissue. In recent years, the study of this kind of tumour has been a challenging task due to the nature of these tissues. The neurosurgeon usually finds several problems to detect tumour tissues by the naked eye. In order to address this problem, this work makes use of high spectral resolution samples in the range from 400 nm to 6000 nm, provided by an Agilent Resolutions Pro V.5 spectrometer that has been diagnosed by histopathology. This instrument can sample a single pixel with a very high spectral resolution. The high spectral resolution allows a reliable separation between the different tissues in brain tumour. The proposed approach is based on a hierarchical decision tree. This approach is composed by several systems of Support Vector Machine classifiers. The 225 used samples come from 25 adults (males and females) and have been taken at different surgical procedures at the University Hospital of Southampton. The main goal is to discriminate between tumour tissue and normal tissue. Specifically, it assigns priority to the group of classes known a priori to the classification showed accordingly to the level of detail. The experimental results indicate that the use of the proposed new decision tree approach could be a solution to effectively discriminate between tumour and normal tissue and additionally provide information about the specific tissue for these classes. For our data set, a sensitivity of 100% and a specificity of 99.27% have been obtained when healthy and tumour samples are discriminated. These results clearly indicate that the use of high dimensionality spectral data is a promising and effective technique to indicate if a brain sample is or not affected by cancer with a high reliability.
高光谱成像是一个活跃的遥感应用研究领域。由于光谱分辨率高,这些图像提供了大量关于材料特性的信息。这项工作的重点是利用这类信息来检测肿瘤组织,特别是脑癌组织。近年来,由于这些组织的性质,对这类肿瘤的研究一直是一项具有挑战性的任务。神经外科医生通常通过肉眼发现几个问题来检测肿瘤组织。为了解决这个问题,这项工作利用了400 nm到6000 nm范围内的高光谱分辨率样品,由组织病理学诊断的安捷伦resolution Pro V.5光谱仪提供。这台仪器可以以非常高的光谱分辨率对单个像素进行采样。高光谱分辨率使得脑肿瘤中不同组织之间的分离可靠。所提出的方法基于分层决策树。该方法由多个支持向量机分类器系统组成。225个样本来自25个成年人(男性和女性),并在南安普顿大学医院的不同外科手术中采集。主要目的是区分肿瘤组织和正常组织。具体来说,它将优先级分配给根据详细程度所显示的分类先验已知的类组。实验结果表明,使用所提出的新决策树方法可以有效地区分肿瘤和正常组织,并为这些类别提供有关特定组织的信息。对于我们的数据集,在区分健康样本和肿瘤样本时,获得了100%的灵敏度和99.27%的特异性。这些结果清楚地表明,使用高维光谱数据是一种有前途和有效的技术,可以高可靠性地表明大脑样本是否受到癌症的影响。