{"title":"Tagging gene and protein names in full text articles","authors":"L. Tanabe, W. Wilbur","doi":"10.3115/1118149.1118151","DOIUrl":null,"url":null,"abstract":"Current information extraction efforts in the biomedical domain tend to focus on finding entities and facts in structured databases or MEDLINE® abstracts. We apply a gene and protein name tagger trained on Medline abstracts (ABGene) to a randomly selected set of full text journal articles in the biomedical domain. We show the effect of adaptations made in response to the greater heterogeneity of full text.","PeriodicalId":339993,"journal":{"name":"ACL Workshop on Natural Language Processing in the Biomedical Domain","volume":"1 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2002-07-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"65","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACL Workshop on Natural Language Processing in the Biomedical Domain","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3115/1118149.1118151","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 65
Abstract
Current information extraction efforts in the biomedical domain tend to focus on finding entities and facts in structured databases or MEDLINE® abstracts. We apply a gene and protein name tagger trained on Medline abstracts (ABGene) to a randomly selected set of full text journal articles in the biomedical domain. We show the effect of adaptations made in response to the greater heterogeneity of full text.
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