Phylogenetic relationships and historical biogeography of Otus species based on mitochondrial cytochrome b gene sequence

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2023-10-17 DOI:10.1163/22244662-bja10062
Bernard Peter O. Daipan, Ivy Amor F. Lambio, Juan Carlos T. Gonzales, Nelson M. Pampolina
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Abstract

Abstract This study analyzed mitochondrial cytochrome b gene sequences to infer Otus species’ phylogenetic relationships and historical biogeography. The researchers used Maximum Parsimony and Maximum Likelihood methods to generate the phylogenetic trees. They constructed a Bayesian MCC Chronogram Tree to determine the Otus species’ age and speciation events. Paleoclimate and paleogeology maps were also used to correlate the branching out of Otus species with geological time periods and climatic conditions. The results showed five major clusters or clades for the core taxon group ( Otus ) and one for the sister group ( Tyto ). The Bayesian tree showed seven major clades for Otus , with the first speciation occurrence dating back to 21.54 mya during the Early Miocene epoch. Most of the core taxon species speciated during the Pliocene Period, with some exceptions. The paleoclimate data indicated that Otus clades branched out during the Icehouse climate state, with the first branching out occurring during the Coolhouse climatic state. The paleogeologic data revealed that the African and American (North and South) continents were already distinct and divided by the Atlantic Ocean during the first branching out of the Otus clade. The distribution areas of Otus species were also mapped using updated Wallace’s zoogeographic realms. Overall, this study provides a better understanding of the phylogenetic history of Otus species and their diversification in relation to geological and climatic events. However, the authors caution that all phylogenetic trees, evolutionary studies, and divergence time estimates should be considered hypotheses with significant uncertainty.
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基于线粒体细胞色素b基因序列的鼠种系统发育关系及历史生物地理学研究
摘要本研究通过分析线粒体细胞色素b基因序列,推测Otus物种的系统发育关系和历史生物地理。研究人员使用最大简约和最大似然方法来生成系统发育树。他们构建了贝叶斯MCC时序图树来确定Otus物种的年龄和物种形成事件。古气候和古地质图也被用来将Otus物种的分支与地质时期和气候条件联系起来。结果表明,核心类群(Otus)和姊妹类群(Tyto)分别有5个主要聚类或进化枝。贝叶斯树显示了Otus的7个主要分支,第一个物种形成可以追溯到21.54万年前的中新世早期。除个别例外,大部分核心分类群形成于上新世时期。古气候资料表明,奥氏枝在冰窖气候状态下出现分支,而在冷库气候状态下首次出现分支。古地质数据显示,在奥特斯进化支的第一个分支出现时,非洲大陆和美洲大陆(南北大陆)已经被大西洋分开了。利用更新的华莱士动物地理领域,绘制了Otus物种的分布区域。总体而言,该研究有助于更好地了解Otus物种的系统发育历史及其与地质和气候事件的关系。然而,作者警告说,所有的系统发育树、进化研究和分化时间估计都应该被认为是具有重大不确定性的假设。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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