Information-reference system on human brain development

Alexandra Proshchina, Yevgeniy М. Dremin, Anastasia S. Kharlamova, Dmitriy A. Otlyga, Olga S. Godovalova, Yu. S. Krivova, Evgeniya O. Grushetskaya, Sergey V. Saveliev
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 AIM: The aim of this study was to create a prototype of an informational reference system on human brain development, incorporating a digital multimodal atlas with the ability to view specific brain regions.
 METHODS: The creation of a prototype informational reference system on human brain prenatal morphogenesis involved the following stages: researching the subject area, developing an informational model, defining automation tasks and functionality of the information system, selecting hardware and software tools, testing, and analyzing results.
 RESULTS: Based on the analysis, a prototype of the informational reference system \"Human Brain Development Atlas\" has been developed, consisting of three main blocks for each ontogenetic stage:
 1) \"Description of Brain Development Stage\": This section includes a macroscopic description of brain structure, an overview of key morphogenetic events, and galleries with hematoxylin and eosin, Nissl, and Mallory stained sections.
 2) \"Reference Atlases\": This module contains annotated maps of brain sections at different stages of prenatal ontogenesis.
 3) \"Immunohistochemical Atlases\": This module provides data on the developmental translational profile of brain cells.
 Currently, some of the materials are already available on the project website: https://brainmorphology.science/ru/
 CONCLUSION: Modern information technologies can be used for data collection and processing on human brain prenatal morphogenesis. The creation of an informational reference system on human brain prenatal morphogenesis can contribute to the development of new methods for early diagnosis and treatment of various nervous system disorders.","PeriodicalId":74226,"journal":{"name":"Morfologiia (Saint Petersburg, Russia)","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2023-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Morfologiia (Saint Petersburg, Russia)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.17816/morph.603840","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
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Abstract

BACKGROUND: The information about intrauterine maturation of the human brain is fragmentary, which make it necessary to systematize these data in the form of an information reference system. A modern solution would be the creation of a multimodal digital atlas, which would combine images of the developing brain at the macro-morphological, tissue, and cellular levels. AIM: The aim of this study was to create a prototype of an informational reference system on human brain development, incorporating a digital multimodal atlas with the ability to view specific brain regions. METHODS: The creation of a prototype informational reference system on human brain prenatal morphogenesis involved the following stages: researching the subject area, developing an informational model, defining automation tasks and functionality of the information system, selecting hardware and software tools, testing, and analyzing results. RESULTS: Based on the analysis, a prototype of the informational reference system "Human Brain Development Atlas" has been developed, consisting of three main blocks for each ontogenetic stage: 1) "Description of Brain Development Stage": This section includes a macroscopic description of brain structure, an overview of key morphogenetic events, and galleries with hematoxylin and eosin, Nissl, and Mallory stained sections. 2) "Reference Atlases": This module contains annotated maps of brain sections at different stages of prenatal ontogenesis. 3) "Immunohistochemical Atlases": This module provides data on the developmental translational profile of brain cells. Currently, some of the materials are already available on the project website: https://brainmorphology.science/ru/ CONCLUSION: Modern information technologies can be used for data collection and processing on human brain prenatal morphogenesis. The creation of an informational reference system on human brain prenatal morphogenesis can contribute to the development of new methods for early diagnosis and treatment of various nervous system disorders.
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人类大脑发育信息参考系统
背景:关于人类大脑宫内成熟的信息是零碎的,有必要以信息参考系统的形式将这些数据系统化。一个现代的解决方案是创建一个多模态数字图谱,它将在宏观形态学、组织和细胞水平上结合发育中的大脑的图像。目的:本研究的目的是创建一个关于人类大脑发育的信息参考系统的原型,该系统结合了一个具有查看特定大脑区域能力的数字多模态图谱。 方法:构建人脑产前形态发生信息参考系统原型,需经过学科领域的研究、信息模型的建立、信息系统自动化任务和功能的确定、硬件和软件工具的选择、测试和结果分析等阶段。 结果:在分析的基础上,构建了“人脑发育图谱”信息参考系统的原型,该信息参考系统由三个主要模块组成: 1)“大脑发育阶段描述”:这部分包括大脑结构的宏观描述,关键形态发生事件的概述,苏木精和伊红,尼氏染色和马洛里染色切片的图。 2) “参考地图集”:该模块包含产前个体发生不同阶段的大脑切片注释图。 3)“免疫组织化学图谱”:该模块提供了脑细胞发育转化谱的数据。 目前,部分材料已经在项目网站上提供:https://brainmorphology.science/ru/ 结论:现代信息技术可用于人脑产前形态发生的数据采集和处理。人脑产前形态发生信息参考系统的建立有助于开发各种神经系统疾病的早期诊断和治疗新方法。
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