Physical phase field model for phagocytosis

Benjamin Winkler, Mohammad Abu Hamed, Alexander A. Nepomnyashchy, Falko Ziebert
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Abstract

We propose and study a simple, physical model for phagocytosis, i.e. the active, actin-mediated uptake of micron-sized particles by biological cells. The cell is described by the phase field method and the driving mechanisms of uptake are actin ratcheting, modeled by a dynamic vector field, as well as cell-particle adhesion due to receptor-ligand binding. We first test the modeling framework for the symmetric situation of a spherical cell engulfing a fixed spherical particle. We then exemplify its versatility by studying various asymmetric situations like different particle shapes and orientations, as well as the simultaneous uptake of two particles. In addition, we perform a perturbation theory of a slightly modified model version in the symmetric setting, allowing to derive a reduced model, shedding light on the effective driving forces and being easier to solve. This work is meant as a first step in describing phagocytosis and we discuss several effects that are amenable to future modeling within the same framework.
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吞噬作用的物理相场模型
我们提出并研究了一个简单的物理吞噬模型,即生物细胞对微米大小颗粒的活性,肌动蛋白介导的摄取。该细胞由相场方法描述,其摄取的驱动机制是肌动蛋白棘轮,由动态矢量场模拟,以及由于受体-配体结合而导致的细胞-颗粒粘附。我们首先测试了球形细胞吞没固定球形粒子的对称情况的建模框架。然后,我们通过研究不同的不对称情况,如不同的粒子形状和方向,以及同时摄取两个粒子,来举例说明它的多功能性。此外,我们在对称设置中执行略微修改的模型版本的孔径理论,允许导出简化模型,揭示有效驱动力并且更容易求解。这项工作是描述吞噬作用的第一步,我们讨论了在同一框架内适合未来建模的几种效应。
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