Evolutionary and expression analysis of sugar transporters from Tartary buckwheat revealed the potential function of FtERD23 in drought stress

IF 4.6 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Journal of Integrative Agriculture Pub Date : 2024-03-06 DOI:10.1016/j.jia.2024.03.031
Dili Lai, Md. Nurul Huda, Yawen Xiao, Tanzim Jahan, Wei Li, Yuqi He, Kaixuan Zhang, Jianping Cheng, Jingjun Ruan, Meiliang Zhou
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Abstract

Drought is becoming a common threat to crop production. To combat this stress and ensure global food security, the identification and utilization of excellent drought-resistant genes are crucial for developing drought-resistant crop varieties. However, sugar transporters are known to be involved in stress tolerance in many plants, while the sugar transporter gene family of Tartary buckwheat has not been systematically analyzed yet. In this study, 140 sugar transporter genes were identified from the ‘Pinku’ Tartary buckwheat genome and classified into ten subfamilies. Structural analysis showed that subfamily SGB/pGlcT had the highest number of introns compared to other subfamilies, and abundant abiotic stress-related -acting elements existed in the promoter region. Collinear analysis revealed that , , , and genes are relatively ancient. The expression of sugar transporter genes was screened under various abiotic stresses which revealed the association of stress tolerance with different sugar transporter genes, i.e., , , , and . Further, it was observed that the overexpression of maintains osmotic pressure through glucose transport, which may enhance drought stress tolerance. Moreover, gene co-expression analyses using WGCNA and FCMA identified six transcription factors that may regulate expression and are involved in plant drought tolerance. In summary, this systematic analysis provides a theoretical basis for further functional characterization of sugar transporter genes to improve drought tolerance in Tartary buckwheat and its related species.
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鞑靼荞麦糖转运体的进化和表达分析揭示了 FtERD23 在干旱胁迫中的潜在功能
干旱正在成为作物生产的常见威胁。为了应对这种压力,确保全球粮食安全,鉴定和利用优秀的抗旱基因对于开发抗旱作物品种至关重要。然而,已知糖转运体参与了许多植物的抗逆性,但鞑靼荞麦的糖转运体基因家族尚未得到系统分析。本研究从'Pinku'鞑靼荞麦基因组中鉴定出 140 个糖转运体基因,并将其分为 10 个亚族。结构分析表明,与其他亚家族相比,SGB/pGlcT亚家族内含子数量最多,启动子区域存在丰富的非生物胁迫相关作用元件。对偶分析表明,、、和基因相对古老。对各种非生物胁迫下糖转运体基因的表达进行了筛选,结果显示,胁迫耐受性与不同的糖转运体基因(即 、 、 和 )有关。此外,还观察到葡萄糖转运基因的过度表达可通过葡萄糖转运维持渗透压,从而增强对干旱胁迫的耐受性。此外,利用 WGCNA 和 FCMA 进行的基因共表达分析发现了六个可能调控表达并参与植物抗旱的转录因子。总之,这项系统分析为进一步确定糖转运体基因的功能特性提供了理论依据,从而提高鞑靼荞麦及其相关物种的耐旱性。
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来源期刊
Journal of Integrative Agriculture
Journal of Integrative Agriculture AGRICULTURE, MULTIDISCIPLINARY-
CiteScore
7.90
自引率
4.20%
发文量
4817
审稿时长
3-6 weeks
期刊介绍: Journal of Integrative Agriculture publishes manuscripts in the categories of Commentary, Review, Research Article, Letter and Short Communication, focusing on the core subjects: Crop Genetics & Breeding, Germplasm Resources, Physiology, Biochemistry, Cultivation, Tillage, Plant Protection, Animal Science, Veterinary Science, Soil and Fertilization, Irrigation, Plant Nutrition, Agro-Environment & Ecology, Bio-material and Bio-energy, Food Science, Agricultural Economics and Management, Agricultural Information Science.
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