Applying artificial intelligence to accelerate and de-risk antibody discovery

Astrid Musnier, Christophe Dumet, Saheli Mitra, Adrien Verdier, Raouf Keskes, Augustin Chassine, Yann Jullian, Mélanie Cortes, Yannick Corde, Z. Omahdi, Vincent Puard, T. Bourquard, A. Poupon
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Abstract

As in all sectors of science and industry, artificial intelligence (AI) is meant to have a high impact in the discovery of antibodies in the coming years. Antibody discovery was traditionally conducted through a succession of experimental steps: animal immunization, screening of relevant clones, in vitro testing, affinity maturation, in vivo testing in animal models, then different steps of humanization and maturation generating the candidate that will be tested in clinical trials. This scheme suffers from different flaws, rendering the whole process very risky, with an attrition rate over 95%. The rise of in silico methods, among which AI, has been gradually proven to reliably guide different experimental steps with more robust processes. They are now capable of covering the whole discovery process. Amongst the players in this new field, the company MAbSilico proposes an in silico pipeline allowing to design antibody sequences in a few days, already humanized and optimized for affinity and developability, considerably de-risking and accelerating the discovery process.
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应用人工智能加速抗体发现并降低风险
与所有科学和工业领域一样,人工智能(AI)将在未来几年对抗体的发现产生重大影响。抗体的发现传统上是通过一系列实验步骤进行的:动物免疫、筛选相关克隆、体外测试、亲和力成熟、动物模型体内测试,然后通过不同的人源化和成熟步骤产生候选抗体,并在临床试验中进行测试。这一方案存在各种缺陷,导致整个过程风险很大,损耗率超过 95%。硅学方法(其中包括人工智能)的兴起已逐渐被证明能以更稳健的流程可靠地指导不同的实验步骤。现在,它们已经能够覆盖整个发现过程。在这一新领域的参与者中,MAbSilico 公司提出了一种硅学管道,可以在几天内设计出抗体序列,这些序列已经人性化,并针对亲和性和可开发性进行了优化,从而大大降低了风险,加快了发现过程。
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