Unveiling the microbial symphony: Next-Gen sequencing and bioinformatics insights into the human gut microbiome

Keerti Maheshwari , Pankaj Musyuni , Amitava Moulick , Harshita Mishra , Adam Ekielski , Pawan Kumar Mishra , Geeta Aggarwal
{"title":"Unveiling the microbial symphony: Next-Gen sequencing and bioinformatics insights into the human gut microbiome","authors":"Keerti Maheshwari ,&nbsp;Pankaj Musyuni ,&nbsp;Amitava Moulick ,&nbsp;Harshita Mishra ,&nbsp;Adam Ekielski ,&nbsp;Pawan Kumar Mishra ,&nbsp;Geeta Aggarwal","doi":"10.1016/j.hsr.2024.100173","DOIUrl":null,"url":null,"abstract":"<div><p>Hundreds of bacteria, viruses, eukaryotes, and archaea comprise the human intestinal microbiota, which constitutes a complex ecology. Recent years have established the significance of the gastrointestinal microbiome in the study of biological microorganisms. Diverse techniques for cultural extraction and analysis make it difficult to cultivate intestinal gut bacteria species. To determine the causative microorganism, it is necessary to investigate microbes and bacteria. Novel and efficacious remedies for illnesses are required. Bioinformatics and next-generation sequencing can assist in the analysis of enormous quantities of sequenced data for bacterial investigations, thereby expanding sequencing. However, advancements in sequencing technology have broadened the scope of bioinformatics identification and analysis. With next-generation sequencing techniques such as metagenomic, 16S rRNA, and meta-transcriptomic sequencing, experimental data regarding the immunological response of the intestinal gut microbiome to genetic manipulation seems to be helpful in identifying the diseases. Despite significant progress over the past two decades, there is still a lack of understanding about the ecology of diseases and treatments. The present review highlights how microbial gene sequencing and analysis of sequencing information can help manage human gut issues.</p></div>","PeriodicalId":73214,"journal":{"name":"Health sciences review (Oxford, England)","volume":"11 ","pages":"Article 100173"},"PeriodicalIF":0.0000,"publicationDate":"2024-04-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772632024000266/pdfft?md5=da82d24864c3695ff2457efc8920d74a&pid=1-s2.0-S2772632024000266-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Health sciences review (Oxford, England)","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2772632024000266","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Hundreds of bacteria, viruses, eukaryotes, and archaea comprise the human intestinal microbiota, which constitutes a complex ecology. Recent years have established the significance of the gastrointestinal microbiome in the study of biological microorganisms. Diverse techniques for cultural extraction and analysis make it difficult to cultivate intestinal gut bacteria species. To determine the causative microorganism, it is necessary to investigate microbes and bacteria. Novel and efficacious remedies for illnesses are required. Bioinformatics and next-generation sequencing can assist in the analysis of enormous quantities of sequenced data for bacterial investigations, thereby expanding sequencing. However, advancements in sequencing technology have broadened the scope of bioinformatics identification and analysis. With next-generation sequencing techniques such as metagenomic, 16S rRNA, and meta-transcriptomic sequencing, experimental data regarding the immunological response of the intestinal gut microbiome to genetic manipulation seems to be helpful in identifying the diseases. Despite significant progress over the past two decades, there is still a lack of understanding about the ecology of diseases and treatments. The present review highlights how microbial gene sequencing and analysis of sequencing information can help manage human gut issues.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
揭开微生物交响乐的神秘面纱:通过新一代测序和生物信息学深入了解人类肠道微生物组
人类肠道微生物群由数百种细菌、病毒、真核生物和古细菌组成,构成了一个复杂的生态环境。近年来,胃肠道微生物群在生物微生物研究中的重要地位已经确立。由于培养提取和分析技术的多样性,肠道细菌种类的培养变得十分困难。要确定致病微生物,就必须研究微生物和细菌。治疗疾病需要新颖而有效的疗法。生物信息学和新一代测序技术可帮助分析大量测序数据,从而扩大测序范围,用于细菌调查。然而,测序技术的进步扩大了生物信息学识别和分析的范围。通过元基因组、16S rRNA 和元转录组测序等新一代测序技术,有关肠道微生物组对遗传操作的免疫学反应的实验数据似乎有助于确定疾病。尽管在过去二十年中取得了重大进展,但人们对疾病的生态学和治疗方法仍然缺乏了解。本综述强调了微生物基因测序和测序信息分析如何帮助管理人类肠道问题。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Health sciences review (Oxford, England)
Health sciences review (Oxford, England) Medicine and Dentistry (General)
自引率
0.00%
发文量
0
审稿时长
75 days
期刊最新文献
An integrative review of cancer-related cachexia and sarcopenia: A different focus in malignant hematology Screening for pancreatic cancer among smokers as high-risk individuals: Systematic review and meta-analysis of prospective cohort studies The impact of reduced perineal lacerations during delivery: A systematic review Revitalizing respiration: A comprehensive review of oxygen therapy in interstitial lung diseases Deciphering the intricacies of immune system dysfunction and its impact on diabetes mellitus: Revisiting the communication strategies to manage diabetes mellitus
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1