Catalytic mechanism and kinetics of malate dehydrogenase.

IF 5.6 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Essays in biochemistry Pub Date : 2024-10-03 DOI:10.1042/EBC20230086
Laura de Lorenzo, Tyler M M Stack, Kristin M Fox, Katherine M Walstrom
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Abstract

Malate dehydrogenase (MDH) is a ubiquitous and central enzyme in cellular metabolism, found in all kingdoms of life, where it plays vital roles in the cytoplasm and various organelles. It catalyzes the reversible NAD+-dependent reduction of L-malate to oxaloacetate. This review describes the reaction mechanism for MDH and the effects of mutations in and around the active site on catalytic activity and substrate specificity, with a particular focus on the loop that encloses the active site after the substrates have bound. While MDH exhibits selectivity for its preferred substrates, mutations can alter the specificity of MDH for each cosubstrate. The kinetic characteristics and similarities of a variety of MDH isozymes are summarized, and they illustrate that the KM values are consistent with the relative concentrations of the substrates in cells. As a result of its existence in different cellular environments, MDH properties vary, making it an attractive model enzyme for studying enzyme activity and structure under different conditions.

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苹果酸脱氢酶的催化机制和动力学。
苹果酸脱氢酶(MDH)是细胞代谢中一种无处不在的核心酶,存在于所有生命体中,在细胞质和各种细胞器中发挥着重要作用。它催化依赖 NAD+ 的 L-苹果酸还原为草酰乙酸的可逆反应。这篇综述介绍了 MDH 的反应机理以及活性位点内部和周围的突变对催化活性和底物特异性的影响,尤其侧重于底物结合后包围活性位点的环路。虽然 MDH 对其首选底物具有选择性,但突变会改变 MDH 对每种共底物的特异性。本文总结了多种 MDH 同工酶的动力学特征和相似性,并说明 KM 值与细胞中底物的相对浓度是一致的。由于存在于不同的细胞环境中,MDH 的特性各不相同,因此它是研究不同条件下酶活性和结构的一种有吸引力的模型酶。
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来源期刊
Essays in biochemistry
Essays in biochemistry 生物-生化与分子生物学
CiteScore
10.50
自引率
0.00%
发文量
105
审稿时长
>12 weeks
期刊介绍: Essays in Biochemistry publishes short, digestible reviews from experts highlighting recent key topics in biochemistry and the molecular biosciences. Written to be accessible for those not yet immersed in the subject, each article is an up-to-date, self-contained summary of the topic. Bridging the gap between the latest research and established textbooks, Essays in Biochemistry will tell you what you need to know to begin exploring the field, as each article includes the top take-home messages as summary points. Each issue of the journal is guest edited by a key opinion leader in the area, and whether you are continuing your studies or moving into a new research area, the Journal gives a complete picture in one place. Essays in Biochemistry is proud to publish Understanding Biochemistry, an essential online resource for post-16 students, teachers and undergraduates. Providing up-to-date overviews of key concepts in biochemistry and the molecular biosciences, the Understanding Biochemistry issues of Essays in Biochemistry are published annually in October.
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