A method for in situ self-assembly of the catalytic peptide in enzymatic compartments of glucan particles.

4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Methods in enzymology Pub Date : 2024-01-01 Epub Date: 2024-02-10 DOI:10.1016/bs.mie.2024.01.021
Tiezheng Pan, Yaling Wang, Chunqiu Zhang
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Abstract

Drawing inspiration from cellular compartmentalization, enzymatic compartments play a pivotal role in bringing enzymes and substrates into confined environments, offering heightened catalytic efficiency and prolonged enzyme lifespan. Previously, we engineered bioinspired enzymatic compartments, denoted as TPE-Q18H@GPs, achieved through the spatiotemporally controllable self-assembly of the catalytic peptide TPE-Q18H within hollow porous glucan particles (GPs). This design strategy allows substrates and products to freely traverse, while retaining enzymatic aggregations. The confined environment led to the formation of catalytic nanofibers, resulting in enhanced substrate binding affinity and a more than two-fold increase in the second-order kinetic constant (kcat/Km) compared to TPE-Q18H nanofibers in a dispersed system. In this work, we will introduce how to synthesize the above-mentioned enzymatic compartments using salt-responsive catalytic peptides and GPs.

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在葡聚糖颗粒的酶区中原位自组装催化肽的方法。
从细胞区隔中汲取灵感,酶区在将酶和底物带入密闭环境中发挥了关键作用,从而提高了催化效率并延长了酶的寿命。在此之前,我们通过在中空多孔葡聚糖颗粒(GPs)内对催化肽 TPE-Q18H 进行时空可控的自组装,设计出了生物启发的酶区,称为 TPE-Q18H@GPs。这种设计策略允许底物和产物自由穿越,同时保留了酶的聚集。密闭环境导致催化纳米纤维的形成,从而增强了底物结合亲和力,与分散体系中的 TPE-Q18H 纳米纤维相比,二阶动力学常数(kcat/Km)增加了两倍多。在这项工作中,我们将介绍如何利用盐响应催化肽和 GPs 合成上述酶区。
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来源期刊
Methods in enzymology
Methods in enzymology 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
308
审稿时长
3-6 weeks
期刊介绍: The critically acclaimed laboratory standard for almost 50 years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Each volume is eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with over 500 volumes the series contains much material still relevant today and is truly an essential publication for researchers in all fields of life sciences, including microbiology, biochemistry, cancer research and genetics-just to name a few. Five of the 2013 Nobel Laureates have edited or contributed to volumes of MIE.
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