Synthetic community derived from grafted watermelon rhizosphere provides protection for ungrafted watermelon against Fusarium oxysporum via microbial synergistic effects

IF 13.8 1区 生物学 Q1 MICROBIOLOGY Microbiome Pub Date : 2024-06-05 DOI:10.1186/s40168-024-01814-z
Yizhu Qiao, Zhendong Wang, Hong Sun, Hanyue Guo, Yang Song, He Zhang, Yang Ruan, Qicheng Xu, Qiwei Huang, Qirong Shen, Ning Ling
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Abstract

Plant microbiota contributes to plant growth and health, including enhancing plant resistance to various diseases. Despite remarkable progress in understanding diseases resistance in plants, the precise role of rhizosphere microbiota in enhancing watermelon resistance against soil-borne diseases remains unclear. Here, we constructed a synthetic community (SynCom) of 16 core bacterial strains obtained from the rhizosphere of grafted watermelon plants. We further simplified SynCom and investigated the role of bacteria with synergistic interactions in promoting plant growth through a simple synthetic community. Our results demonstrated that the SynCom significantly enhanced the growth and disease resistance of ungrafted watermelon grown in non-sterile soil. Furthermore, analysis of the amplicon and metagenome data revealed the pivotal role of Pseudomonas in enhancing plant health, as evidenced by a significant increase in the relative abundance and biofilm-forming pathways of Pseudomonas post-SynCom inoculation. Based on in vitro co-culture experiments and bacterial metabolomic analysis, we selected Pseudomonas along with seven other members of the SynCom that exhibited synergistic effects with Pseudomonas. It enabled us to further refine the initially constructed SynCom into a simplified SynCom comprising the eight selected bacterial species. Notably, the plant-promoting effects of simplified SynCom were similar to those of the initial SynCom. Furthermore, the simplified SynCom protected plants through synergistic effects of bacteria. Our findings suggest that the SynCom proliferate in the rhizosphere and mitigate soil-borne diseases through microbial synergistic interactions, highlighting the potential of synergistic effects between microorganisms in enhancing plant health. This study provides a novel insight into using the functional SynCom as a promising solution for sustainable agriculture.
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来自嫁接西瓜根瘤层的合成群落通过微生物协同效应保护未嫁接西瓜免受镰刀菌侵染
植物微生物群有助于植物的生长和健康,包括增强植物对各种病害的抵抗力。尽管在了解植物抗病性方面取得了重大进展,但根瘤菌群在增强西瓜对土传病害的抗性方面的确切作用仍不清楚。在这里,我们构建了一个合成群落(SynCom),其中包括从嫁接西瓜植株根瘤菌层中获得的 16 个核心细菌菌株。我们进一步简化了 SynCom,并通过简单的合成群落研究了具有协同作用的细菌在促进植物生长方面的作用。结果表明,SynCom 能显著提高在非无菌土壤中生长的未嫁接西瓜的生长和抗病能力。此外,对扩增子和元基因组数据的分析表明,SynCom 接种后假单胞菌的相对丰度和生物膜形成途径显著增加,证明假单胞菌在促进植物健康方面发挥了关键作用。根据体外共培养实验和细菌代谢组学分析,我们选出了假单胞菌以及与假单胞菌一起表现出协同效应的其他七种 SynCom 成员。这使我们能够进一步完善最初构建的 SynCom,将其简化为由所选的 8 种细菌组成的 SynCom。值得注意的是,简化后的 SynCom 对植物的促进作用与最初的 SynCom 相似。此外,简化后的 SynCom 还能通过细菌的协同作用保护植物。我们的研究结果表明,SynCom 可在根瘤菌层中增殖,并通过微生物的协同作用减轻土传病害,这凸显了微生物之间的协同作用在增强植物健康方面的潜力。这项研究为利用功能性 SynCom 作为可持续农业的可行解决方案提供了新的视角。
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来源期刊
Microbiome
Microbiome MICROBIOLOGY-
CiteScore
21.90
自引率
2.60%
发文量
198
审稿时长
4 weeks
期刊介绍: Microbiome is a journal that focuses on studies of microbiomes in humans, animals, plants, and the environment. It covers both natural and manipulated microbiomes, such as those in agriculture. The journal is interested in research that uses meta-omics approaches or novel bioinformatics tools and emphasizes the community/host interaction and structure-function relationship within the microbiome. Studies that go beyond descriptive omics surveys and include experimental or theoretical approaches will be considered for publication. The journal also encourages research that establishes cause and effect relationships and supports proposed microbiome functions. However, studies of individual microbial isolates/species without exploring their impact on the host or the complex microbiome structures and functions will not be considered for publication. Microbiome is indexed in BIOSIS, Current Contents, DOAJ, Embase, MEDLINE, PubMed, PubMed Central, and Science Citations Index Expanded.
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