An Unusual Ferryl Intermediate and Its Implications for the Mechanism of Oxacyclization by the Loline-Producing Iron(II)- and 2-Oxoglutarate-Dependent Oxygenase, LolO

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemistry Biochemistry Pub Date : 2024-06-19 DOI:10.1021/acs.biochem.4c00166
Juan Pan, Eliott S. Wenger, Chi-Yun Lin, Bo Zhang, Debangsu Sil, Irene Schaperdoth, Setareh Saryazdi, Robert B. Grossman, Carsten Krebs* and J. Martin Bollinger Jr.*, 
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Abstract

N-Acetylnorloline synthase (LolO) is one of several iron(II)- and 2-oxoglutarate-dependent (Fe/2OG) oxygenases that catalyze sequential reactions of different types in the biosynthesis of valuable natural products. LolO hydroxylates C2 of 1-exo-acetamidopyrrolizidine before coupling the C2-bonded oxygen to C7 to form the tricyclic loline core. Each reaction requires cleavage of a C–H bond by an oxoiron(IV) (ferryl) intermediate; however, different carbons are targeted, and the carbon radicals have different fates. Prior studies indicated that the substrate-cofactor disposition (SCD) controls the site of H· abstraction and can affect the reaction outcome. These indications led us to determine whether a change in SCD from the first to the second LolO reaction might contribute to the observed reactivity switch. Whereas the single ferryl complex in the C2 hydroxylation reaction was previously shown to have typical Mössbauer parameters, one of two ferryl complexes to accumulate during the oxacyclization reaction has the highest isomer shift seen to date for such a complex and abstracts H· from C7 ∼ 20 times faster than does the first ferryl complex in its previously reported off-pathway hydroxylation of C7. The detectable hydroxylation of C7 in competition with cyclization by the second ferryl complex is not enhanced in 2H2O solvent, suggesting that the C2 hydroxyl is deprotonated prior to C7–H cleavage. These observations are consistent with the coordination of the C2 oxygen to the ferryl complex, which may reorient its oxo ligand, the substrate, or both to positions more favorable for C7–H cleavage and oxacyclization.

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一种不寻常的 Ferryl 中间体及其对产生洛林的铁(II)和 2-氧代戊二酸依赖性加氧酶 LolO 氧化作用机制的影响。
N-Acetylnorloline 合酶(LolO)是几种依赖铁(II)和 2-氧代戊二酸(Fe/2OG)的加氧酶之一,在有价值的天然产品的生物合成过程中催化不同类型的连续反应。LolO 先羟化 1-exo-acetamidopyrrolizidine 的 C2,然后将 C2 键合的氧与 C7 连接,形成三环络氨酸核心。每个反应都需要氧铁(IV)(ferryl)中间体裂解一个 C-H 键;但是,所针对的碳原子不同,碳自由基的命运也不同。先前的研究表明,底物-因子配置(SCD)控制着 H-抽离的部位,并能影响反应的结果。这些迹象促使我们确定,从第一个 LolO 反应到第二个 LolO 反应,SCD 的变化是否会导致观察到的反应性转换。之前的研究表明,C2羟化反应中的单渡酰复合物具有典型的莫斯鲍尔参数,而在氧杂环化反应中积累的两个渡酰复合物中的一个具有迄今为止此类复合物中最高的异构体偏移,并且从 C7 中萃取 H- 的速度比之前报道的第一个渡酰复合物在 C7 的非途径羟化反应中的速度快 20 倍。在 2H2O 溶剂中,与第二种摆渡醇复合物的环化作用竞争的 C7 羟基化作用并没有增强,这表明 C2 羟基在 C7-H 裂解之前就已经被去质子化了。这些观察结果与 C2 氧与渡轮络合物的配位一致,渡轮络合物可能会将其氧配体、底物或两者重新定向到更有利于 C7-H 裂解和氧环化的位置。
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来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
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