Probing the versatility of cytochrome c by spectroscopic means: A Laudatio on resonance Raman spectroscopy

IF 3.2 2区 化学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Inorganic Biochemistry Pub Date : 2024-10-01 Epub Date: 2024-06-17 DOI:10.1016/j.jinorgbio.2024.112641
Reinhard Schweitzer-Stenner
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Abstract

Over the last 50 years resonance Raman spectroscopy has become an invaluable tool for the exploration of chromophores in biological macromolecules. Among them, heme proteins and metal complexes have attracted considerable attention. This interest results from the fact that resonance Raman spectroscopy probes the vibrational dynamics of these chromophores without direct interference from the surrounding. However, the indirect influence via through-bond and through-space chromophore-protein interactions can be conveniently probed and analyzed. This review article illustrates this point by focusing on class 1 cytochrome c, a comparatively simple heme protein generally known as electron carrier in mitochondria. The article demonstrates how through selective excitation of resonance Raman active modes information about the ligation, the redox state and the spin state of the heme iron can be obtained from band positions in the Raman spectra. The investigation of intensities and depolarization ratios emerged as tools for the analysis of in-plane and out-of-plane deformations of the heme macrocycle. The article further shows how resonance Raman spectroscopy was used to characterize partially unfolded states of oxidized cytochrome c. Finally, it describes its use for exploring structural changes due to the protein's binding to anionic surfaces like cardiolipin containing membranes.

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通过光谱手段探索细胞色素 c 的多功能性:对共振拉曼光谱的赞誉
过去 50 年来,共振拉曼光谱已成为研究生物大分子发色团的重要工具。其中,血红素蛋白和金属复合物备受关注。这种兴趣源于共振拉曼光谱可以探测这些发色团的振动动态,而不受周围环境的直接干扰。不过,通过发色团与蛋白质之间的通键和通空相互作用所产生的间接影响也可以方便地进行探测和分析。这篇综述文章以 1 类细胞色素 c 为例说明了这一点,这是一种比较简单的血红素蛋白,通常被称为线粒体中的电子载体。文章展示了如何通过选择性激发共振拉曼活性模式,从拉曼光谱中的波段位置获取有关血红素铁的连接、氧化还原状态和自旋状态的信息。对强度和去极化比的研究成为分析血红素大环平面内和平面外变形的工具。文章进一步说明了共振拉曼光谱如何用于描述氧化细胞色素 c 的部分折叠状态。最后,文章介绍了共振拉曼光谱如何用于探索蛋白质与含膜的心磷脂等阴离子表面结合所导致的结构变化。
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来源期刊
Journal of Inorganic Biochemistry
Journal of Inorganic Biochemistry 生物-生化与分子生物学
CiteScore
7.00
自引率
10.30%
发文量
336
审稿时长
41 days
期刊介绍: The Journal of Inorganic Biochemistry is an established international forum for research in all aspects of Biological Inorganic Chemistry. Original papers of a high scientific level are published in the form of Articles (full length papers), Short Communications, Focused Reviews and Bioinorganic Methods. Topics include: the chemistry, structure and function of metalloenzymes; the interaction of inorganic ions and molecules with proteins and nucleic acids; the synthesis and properties of coordination complexes of biological interest including both structural and functional model systems; the function of metal- containing systems in the regulation of gene expression; the role of metals in medicine; the application of spectroscopic methods to determine the structure of metallobiomolecules; the preparation and characterization of metal-based biomaterials; and related systems. The emphasis of the Journal is on the structure and mechanism of action of metallobiomolecules.
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