Peak detection in intracranial pressure signal waveforms: a comparative study.

IF 2.9 4区 医学 Q3 ENGINEERING, BIOMEDICAL BioMedical Engineering OnLine Pub Date : 2024-06-24 DOI:10.1186/s12938-024-01245-9
Miaomiao Wei, Solventa Krakauskaite, Sreya Subramanian, Fabien Scalzo
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Abstract

Background: The monitoring and analysis of quasi-periodic biological signals such as electrocardiography (ECG), intracranial pressure (ICP), and cerebral blood flow velocity (CBFV) waveforms plays an important role in the early detection of adverse patient events and contributes to improved care management in the intensive care unit (ICU). This work quantitatively evaluates existing computational frameworks for automatically extracting peaks within ICP waveforms.

Methods: Peak detection techniques based on state-of-the-art machine learning models were evaluated in terms of robustness to varying noise levels. The evaluation was performed on a dataset of ICP signals assembled from 700 h of monitoring from 64 neurosurgical patients. The groundtruth of the peak locations was established manually on a subset of 13, 611 pulses. Additional evaluation was performed using a simulated dataset of ICP with controlled temporal dynamics and noise.

Results: The quantitative analysis of peak detection algorithms applied to individual waveforms indicates that most techniques provide acceptable accuracy with a mean absolute error (MAE) 10 ms without noise. In the presence of a higher noise level, however, only kernel spectral regression and random forest remain below that error threshold while the performance of other techniques deteriorates. Our experiments also demonstrated that tracking methods such as Bayesian inference and long short-term memory (LSTM) can be applied continuously and provide additional robustness in situations where single pulse analysis methods fail, such as missing data.

Conclusion: While machine learning-based peak detection methods require manually labeled data for training, these models outperform conventional signal processing ones based on handcrafted rules and should be considered for peak detection in modern frameworks. In particular, peak tracking methods that incorporate temporal information between successive periods of the signals have demonstrated in our experiments to provide more robustness to noise and temporary artifacts that commonly arise as part of the monitoring setup in the clinical setting.

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颅内压信号波形的峰值检测:一项比较研究。
背景:对准周期性生物信号(如心电图(ECG)、颅内压(ICP)和脑血流速度(CBFV)波形)的监测和分析在早期发现患者不良事件方面发挥着重要作用,并有助于改善重症监护室(ICU)的护理管理。这项工作定量评估了现有的计算框架,以自动提取 ICP 波形中的峰值:方法:评估了基于最先进机器学习模型的峰值检测技术对不同噪声水平的鲁棒性。评估是在 64 名神经外科患者 700 小时的 ICP 信号数据集上进行的。峰值位置的基本事实是在 13,611 个脉冲子集上手动确定的。另外,还使用具有可控时间动态和噪声的 ICP 模拟数据集进行了评估:对应用于单个波形的峰值检测算法进行的定量分析表明,大多数技术在无噪声的情况下,平均绝对误差(MAE)小于 10 毫秒,精度可以接受。然而,在噪声水平较高的情况下,只有核谱回归和随机森林仍低于该误差阈值,而其他技术的性能则有所下降。我们的实验还证明,贝叶斯推理和长短期记忆(LSTM)等跟踪方法可以连续应用,并在单脉冲分析方法失效(如数据缺失)的情况下提供额外的鲁棒性:虽然基于机器学习的峰值检测方法需要人工标注数据进行训练,但这些模型优于基于手工规则的传统信号处理模型,因此应考虑在现代框架中用于峰值检测。特别是,在我们的实验中,结合了信号连续周期之间的时间信息的峰值跟踪方法对噪声和临时伪影具有更强的鲁棒性,而这些伪影通常是临床监测设置的一部分。
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来源期刊
BioMedical Engineering OnLine
BioMedical Engineering OnLine 工程技术-工程:生物医学
CiteScore
6.70
自引率
2.60%
发文量
79
审稿时长
1 months
期刊介绍: BioMedical Engineering OnLine is an open access, peer-reviewed journal that is dedicated to publishing research in all areas of biomedical engineering. BioMedical Engineering OnLine is aimed at readers and authors throughout the world, with an interest in using tools of the physical and data sciences and techniques in engineering to understand and solve problems in the biological and medical sciences. Topical areas include, but are not limited to: Bioinformatics- Bioinstrumentation- Biomechanics- Biomedical Devices & Instrumentation- Biomedical Signal Processing- Healthcare Information Systems- Human Dynamics- Neural Engineering- Rehabilitation Engineering- Biomaterials- Biomedical Imaging & Image Processing- BioMEMS and On-Chip Devices- Bio-Micro/Nano Technologies- Biomolecular Engineering- Biosensors- Cardiovascular Systems Engineering- Cellular Engineering- Clinical Engineering- Computational Biology- Drug Delivery Technologies- Modeling Methodologies- Nanomaterials and Nanotechnology in Biomedicine- Respiratory Systems Engineering- Robotics in Medicine- Systems and Synthetic Biology- Systems Biology- Telemedicine/Smartphone Applications in Medicine- Therapeutic Systems, Devices and Technologies- Tissue Engineering
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