Ideas of lattice-basis reduction theory for error-stable Bravais lattice determination and abinitio indexing.

IF 1.9 4区 材料科学 Q3 CHEMISTRY, MULTIDISCIPLINARY Acta Crystallographica Section A: Foundations and Advances Pub Date : 2024-07-01 Epub Date: 2024-06-25 DOI:10.1107/S2053273324004418
Ryoko Oishi-Tomiyasu
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Abstract

In ab initio indexing, for a given diffraction/scattering pattern, the unit-cell parameters and the Miller indices assigned to reflections in the pattern are determined simultaneously. `Ab initio' means a process performed without any good prior information on the crystal lattice. Newly developed ab initio indexing software is frequently reported in crystallography. However, it is not widely recognized that use of a Bravais lattice determination method, which is tolerant of experimental errors, can simplify indexing algorithms and increase their success rates. One of the goals of this article is to collect information on the lattice-basis reduction theory and its applications. The main result is a Bravais lattice determination algorithm for 2D lattices, along with a mathematical proof that it works even for parameters containing large observational errors. It uses two lattice-basis reduction methods that seem to be optimal for different symmetries, similarly to the algorithm for 3D lattices implemented in the CONOGRAPH software. In indexing, a method for error-stable unit-cell identification is also required to exclude duplicate solutions. Several methods are introduced to measure the difference in unit cells known in crystallography and mathematics.

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用于误差稳定的布拉维格确定和无比特索引的格基还原理论思想。
在 ab initio 索引中,对于给定的衍射/散射图样,要同时确定单位晶胞参数和分配给图案中反射的米勒指数。所谓 "非初始",是指在没有任何关于晶格的可靠信息的情况下进行的过程。晶体学领域经常报道新开发的ab initio 索引软件。然而,人们并没有普遍认识到,使用可容忍实验误差的布拉维晶格确定方法可以简化索引算法并提高其成功率。本文的目的之一是收集有关晶格基础还原理论及其应用的信息。主要成果是二维网格的布拉维网格确定算法,以及该算法即使在参数包含较大观测误差时也有效的数学证明。它使用了两种格子基础还原方法,这两种方法似乎是不同对称性的最佳方法,类似于 CONOGRAPH 软件中实现的三维格子算法。在索引过程中,还需要一种误差稳定的单元格识别方法来排除重复解。本文介绍了几种测量晶体学和数学中已知单元格差异的方法。
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来源期刊
Acta Crystallographica Section A: Foundations and Advances
Acta Crystallographica Section A: Foundations and Advances CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
2.60
自引率
11.10%
发文量
419
期刊介绍: Acta Crystallographica Section A: Foundations and Advances publishes articles reporting advances in the theory and practice of all areas of crystallography in the broadest sense. As well as traditional crystallography, this includes nanocrystals, metacrystals, amorphous materials, quasicrystals, synchrotron and XFEL studies, coherent scattering, diffraction imaging, time-resolved studies and the structure of strain and defects in materials. The journal has two parts, a rapid-publication Advances section and the traditional Foundations section. Articles for the Advances section are of particularly high value and impact. They receive expedited treatment and may be highlighted by an accompanying scientific commentary article and a press release. Further details are given in the November 2013 Editorial. The central themes of the journal are, on the one hand, experimental and theoretical studies of the properties and arrangements of atoms, ions and molecules in condensed matter, periodic, quasiperiodic or amorphous, ideal or real, and, on the other, the theoretical and experimental aspects of the various methods to determine these properties and arrangements.
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