A Kernel Attention-based Transformer Model for Survival Prediction of Heart Disease Patients.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2024-08-05 DOI:10.1007/s12265-024-10537-3
Palak Kaushal, Shailendra Singh, Rajesh Vijayvergiya
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Abstract

Survival analysis is employed to scrutinize time-to-event data, with emphasis on comprehending the duration until the occurrence of a specific event. In this article, we introduce two novel survival prediction models: CosAttnSurv and CosAttnSurv + DyACT. CosAttnSurv model leverages transformer-based architecture and a softmax-free kernel attention mechanism for survival prediction. Our second model, CosAttnSurv + DyACT, enhances CosAttnSurv with Dynamic Adaptive Computation Time (DyACT) control, optimizing computation efficiency. The proposed models are validated using two public clinical datasets related to heart disease patients. When compared to other state-of-the-art models, our models demonstrated an enhanced discriminative and calibration performance. Furthermore, in comparison to other transformer architecture-based models, our proposed models demonstrate comparable performance while exhibiting significant reduction in both time and memory requirements. Overall, our models offer significant advancements in the field of survival analysis and emphasize the importance of computationally effective time-based predictions, with promising implications for medical decision-making and patient care.

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基于核注意力的心脏病患者生存预测变压器模型
生存分析用于仔细研究从时间到事件的数据,重点是理解特定事件发生前的持续时间。本文介绍了两种新型生存预测模型:CosAttnSurv 和 CosAttnSurv + DyACT。CosAttnSurv 模型利用基于变压器的架构和无软最大内核关注机制进行生存预测。我们的第二个模型 CosAttnSurv + DyACT 利用动态自适应计算时间(DyACT)控制增强了 CosAttnSurv,优化了计算效率。我们使用两个与心脏病患者相关的公共临床数据集对所提出的模型进行了验证。与其他最先进的模型相比,我们的模型具有更高的判别和校准性能。此外,与其他基于变压器架构的模型相比,我们提出的模型性能相当,同时显著减少了时间和内存需求。总之,我们的模型在生存分析领域取得了重大进展,强调了基于时间的有效计算预测的重要性,对医疗决策和患者护理具有重要意义。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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