Rong Liu, Xiaoyi Wu, Zhouqian Jiang, Xuan Liu, Yifeng Zhang, Huan Zhao, Jie Gao, Wei Gao, Yating Hu, Luqi Huang
{"title":"Characterization of a Xylosyltransferase from <i>Panax notoginseng</i> Catalyzing Ginsenoside 2'-<i>O</i> Glycosylation in the Biosynthesis of Notoginsenosides.","authors":"Rong Liu, Xiaoyi Wu, Zhouqian Jiang, Xuan Liu, Yifeng Zhang, Huan Zhao, Jie Gao, Wei Gao, Yating Hu, Luqi Huang","doi":"10.1021/acs.jnatprod.4c00298","DOIUrl":null,"url":null,"abstract":"<p><p>Notoginsenosides are important bioactive compounds from <i>Panax notoginseng</i> (Burk.) F. H. Chen, most of which have xylose in their sugar chains. However, the xylosyltransferases involved in the generation of notoginsenosides remain poorly understood, posing a bottleneck for further study of the biosynthesis of notoginsenosides. In this work, a new xylosyltransferase gene, <i>PnUGT57</i> (named <i>UGT94BW1</i>), was identified from <i>P. notoginseng</i>, which has a distinct sequence and could catalyze the 2'-<i>O</i> glycosylation of ginsenosides Rh1 and Rg1 to produce notoginsenosides R2 and R1, respectively. We first characterized the optimal conditions for the <i>Pn</i>UGT57 activity and its enzymatic kinetic parameters, and then, molecular docking and site-directed mutagenesis were performed to elucidate the catalytic mechanism of <i>Pn</i>UGT57. Combined with the results of site-directed mutagenesis, Glu26, Ser266, Glu267, Trp347, Ser348, and Glu352 in <i>Pn</i>UGT57 were identified as the key residues involved in 2'-<i>O</i> glycosylation of C-6 O-Glc, and <i>Pn</i>UGT57<sup>R175A</sup> and <i>Pn</i>UGT57<sup>G237A</sup> could significantly improve the catalytic activity of <i>Pn</i>UGT57. These findings not only provide a new xylosyltransferase gene for augmenting the plant xylosyltransferase database but also identify the pivotal sites and catalytic mechanism of the enzyme, which would provide reference for the modification and application of xylosyltransferases in the future.</p>","PeriodicalId":47,"journal":{"name":"Journal of Natural Products ","volume":" ","pages":"2160-2169"},"PeriodicalIF":3.3000,"publicationDate":"2024-09-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Natural Products ","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1021/acs.jnatprod.4c00298","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/8/27 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0
Abstract
Notoginsenosides are important bioactive compounds from Panax notoginseng (Burk.) F. H. Chen, most of which have xylose in their sugar chains. However, the xylosyltransferases involved in the generation of notoginsenosides remain poorly understood, posing a bottleneck for further study of the biosynthesis of notoginsenosides. In this work, a new xylosyltransferase gene, PnUGT57 (named UGT94BW1), was identified from P. notoginseng, which has a distinct sequence and could catalyze the 2'-O glycosylation of ginsenosides Rh1 and Rg1 to produce notoginsenosides R2 and R1, respectively. We first characterized the optimal conditions for the PnUGT57 activity and its enzymatic kinetic parameters, and then, molecular docking and site-directed mutagenesis were performed to elucidate the catalytic mechanism of PnUGT57. Combined with the results of site-directed mutagenesis, Glu26, Ser266, Glu267, Trp347, Ser348, and Glu352 in PnUGT57 were identified as the key residues involved in 2'-O glycosylation of C-6 O-Glc, and PnUGT57R175A and PnUGT57G237A could significantly improve the catalytic activity of PnUGT57. These findings not only provide a new xylosyltransferase gene for augmenting the plant xylosyltransferase database but also identify the pivotal sites and catalytic mechanism of the enzyme, which would provide reference for the modification and application of xylosyltransferases in the future.
田七皂苷是田七(Panax notoginseng (Burk.) F. H. Chen)中的重要生物活性化合物,其中大部分糖链中含有木糖。然而,人们对参与田七皂甙生成的木糖转移酶仍然知之甚少,这成为进一步研究田七皂甙生物合成的瓶颈。本研究从田七中发现了一个新的木糖基转移酶基因PnUGT57(命名为UGT94BW1),它具有独特的序列,可以催化人参皂苷Rh1和Rg1的2'-O糖基化,分别生成皂苷R2和R1。我们首先鉴定了PnUGT57活性的最佳条件及其酶学动力学参数,然后通过分子对接和定点突变阐明了PnUGT57的催化机理。结合定点突变的结果,发现PnUGT57中的Glu26、Ser266、Glu267、Trp347、Ser348和Glu352是参与C-6 O-Glc的2'-O糖基化的关键残基,而PnUGT57R175A和PnUGT57G237A能显著提高PnUGT57的催化活性。这些发现不仅为扩充植物木糖基转移酶数据库提供了一个新的木糖基转移酶基因,而且确定了该酶的关键位点和催化机理,为今后木糖基转移酶的改造和应用提供了参考。
期刊介绍:
The Journal of Natural Products invites and publishes papers that make substantial and scholarly contributions to the area of natural products research. Contributions may relate to the chemistry and/or biochemistry of naturally occurring compounds or the biology of living systems from which they are obtained.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.
When new compounds are reported, manuscripts describing their biological activity are much preferred.
Specifically, there may be articles that describe secondary metabolites of microorganisms, including antibiotics and mycotoxins; physiologically active compounds from terrestrial and marine plants and animals; biochemical studies, including biosynthesis and microbiological transformations; fermentation and plant tissue culture; the isolation, structure elucidation, and chemical synthesis of novel compounds from nature; and the pharmacology of compounds of natural origin.