Substituent effect on the chemical and biological properties of diisatin dihydrazone Schiff bases: DFT and docking studies

IF 2.6 4区 生物学 Q2 BIOLOGY Computational Biology and Chemistry Pub Date : 2024-08-31 DOI:10.1016/j.compbiolchem.2024.108190
Mohamed Shaker S. Adam , Zahraa H.A. Al-Ateya , Mohamed M. Makhlouf , Obadah S. Abdel-Rahman , Amneh Shtaiwi , Ahmed Khalil
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Abstract

According to the considered role of lipophilicity-hydrophobicity on organic Schiff base hydrazones, different substituents of phenyl, ethyl, and methyl groups were inserted in the synthetic strategy of diisatin dihydrazones (L1–4). The biochemical enhancement was evaluated depending on their inhibitive potential of the growth power of three human tumor cells, fungi, and bacteria. The biochemical assays assigned the effected role of different substituents of phenyl, ethyl, and methyl groups on the effectiveness of their diisatin dihydrazone reagents. The interacting modes with calf thymus DNA (i.e. Ct-DNA) were studied via viscometric and spectrophotometric titration.

The organo-reagent L1 with the oxalic derivative assigned a performed inhibitive action for the examined microbes and the human tumor cell lines growing up over the terephthalic (L4) > malonic (L2) > succinic (L3) ones. From Kb = binding constant, and Gb = Gibb’s free energy values, the binding of interaction within Ct-DNA was evaluated for all compounds (L1–4), in which L1, L3, and L4 assigned the highest reactivity referring to the covalent/non-covalent modes of interaction, as given for (L1–4), 14.32, 13.28, 10.87, and 12.41 × 107 mol−1 dm3, and −45.17, −43.24, −43.75, and −44.05 kJ mol−1, respectively. DFT and docking studies were achieved to support the current work.

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取代基对二靛红二腙席夫碱化学和生物特性的影响:DFT 和对接研究
根据亲油疏水性对有机席夫碱肼的作用,在二靛基二肼(L1-4)的合成策略中加入了不同的苯基、乙基和甲基取代基。根据它们对三种人类肿瘤细胞、真菌和细菌生长的抑制潜力,对其生化增强效果进行了评估。生化检测结果表明,苯基、乙基和甲基的不同取代基对二靛红二氢腙试剂的有效性有影响。草酸衍生物有机试剂 L1 对所研究的微生物和人类肿瘤细胞株的抑制作用超过了对苯二甲酸(L4)>;丙二酸(L2)>;琥珀酸(L3)衍生物。根据 Kb = 结合常数和 ∆Gb≠ = 吉布斯自由能值,评估了所有化合物(L1-4)在 Ct-DNA 内的相互作用结合情况,其中 L1、L3 和 L4 具有最高的反应活性,这指的是共价/非共价相互作用模式,如 (L1-4) 所示,14.32、13.28、10.28、14.32、14.32、13.28、10.28。32、13.28、10.87 和 12.41 × 107 mol-1 dm3,以及-45.17、-43.24、-43.75 和 -44.05 kJ mol-1。DFT 和对接研究为当前工作提供了支持。
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来源期刊
Computational Biology and Chemistry
Computational Biology and Chemistry 生物-计算机:跨学科应用
CiteScore
6.10
自引率
3.20%
发文量
142
审稿时长
24 days
期刊介绍: Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered. Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered. Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.
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