Classification of epileptic seizures in EEG data based on iterative gated graph convolution network

IF 2.1 4区 医学 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY Frontiers in Computational Neuroscience Pub Date : 2024-08-29 DOI:10.3389/fncom.2024.1454529
Yue Hu, Jian Liu, Rencheng Sun, Yongqiang Yu, Yi Sui
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Abstract

IntroductionThe automatic and precise classification of epilepsy types using electroencephalogram (EEG) data promises significant advancements in diagnosing patients with epilepsy. However, the intricate interplay among multiple electrode signals in EEG data poses challenges. Recently, Graph Convolutional Neural Networks (GCN) have shown strength in analyzing EEG data due to their capability to describe complex relationships among different EEG regions. Nevertheless, several challenges remain: (1) GCN typically rely on predefined or prior graph topologies, which may not accurately reflect the complex correlations between brain regions. (2) GCN struggle to capture the long-temporal dependencies inherent in EEG signals, limiting their ability to effectively extract temporal features.MethodsTo address these challenges, we propose an innovative epileptic seizure classification model based on an Iterative Gated Graph Convolutional Network (IGGCN). For the epileptic seizure classification task, the original EEG graph structure is iteratively optimized using a multi-head attention mechanism during training, rather than relying on a static, predefined prior graph. We introduce Gated Graph Neural Networks (GGNN) to enhance the model's capacity to capture long-term dependencies in EEG series between brain regions. Additionally, Focal Loss is employed to alleviate the imbalance caused by the scarcity of epileptic EEG data.ResultsOur model was evaluated on the Temple University Hospital EEG Seizure Corpus (TUSZ) for classifying four types of epileptic seizures. The results are outstanding, achieving an average F1 score of 91.5% and an average Recall of 91.8%, showing a substantial improvement over current state-of-the-art models.DiscussionAblation experiments verified the efficacy of iterative graph optimization and gated graph convolution. The optimized graph structure significantly differs from the predefined EEG topology. Gated graph convolutions demonstrate superior performance in capturing the long-term dependencies in EEG series. Additionally, Focal Loss outperforms other commonly used loss functions in the TUSZ classification task.
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基于迭代门控图卷积网络的脑电图数据中的癫痫发作分类
导言:利用脑电图(EEG)数据对癫痫类型进行自动和精确的分类,有望在诊断癫痫患者方面取得重大进展。然而,脑电图数据中多个电极信号之间错综复杂的相互作用带来了挑战。最近,图卷积神经网络(Graph Convolutional Neural Networks,GCN)在分析脑电图数据方面显示出了优势,因为它能够描述不同脑电图区域之间的复杂关系。然而,仍然存在以下几个挑战:(1)GCN 通常依赖于预定义或先验的图拓扑结构,这可能无法准确反映大脑区域之间的复杂关联。(2) GCN 难以捕捉脑电信号固有的长时空依赖性,从而限制了其有效提取时空特征的能力。为了应对这些挑战,我们提出了一种基于迭代门控图卷积网络(IGGCN)的创新性癫痫发作分类模型。针对癫痫发作分类任务,我们在训练过程中使用多头注意机制迭代优化原始脑电图图结构,而不是依赖于静态、预定义的先验图。我们引入了门控图神经网络(GGNN),以增强模型捕捉脑区之间脑电图序列长期依赖关系的能力。此外,我们还采用了 "病灶损失"(Focal Loss)技术来缓解癫痫脑电图数据稀缺所造成的不平衡。结果非常出色,平均 F1 得分为 91.5%,平均 Recall 得分为 91.8%,与目前最先进的模型相比有了大幅提高。讨论消融实验验证了迭代图优化和门控图卷积的功效。优化后的图结构与预定义的脑电图拓扑结构有很大不同。门控图卷积在捕捉脑电图序列的长期依赖性方面表现出卓越的性能。此外,Focal Loss 在 TUSZ 分类任务中的表现优于其他常用损失函数。
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来源期刊
Frontiers in Computational Neuroscience
Frontiers in Computational Neuroscience MATHEMATICAL & COMPUTATIONAL BIOLOGY-NEUROSCIENCES
CiteScore
5.30
自引率
3.10%
发文量
166
审稿时长
6-12 weeks
期刊介绍: Frontiers in Computational Neuroscience is a first-tier electronic journal devoted to promoting theoretical modeling of brain function and fostering interdisciplinary interactions between theoretical and experimental neuroscience. Progress in understanding the amazing capabilities of the brain is still limited, and we believe that it will only come with deep theoretical thinking and mutually stimulating cooperation between different disciplines and approaches. We therefore invite original contributions on a wide range of topics that present the fruits of such cooperation, or provide stimuli for future alliances. We aim to provide an interactive forum for cutting-edge theoretical studies of the nervous system, and for promulgating the best theoretical research to the broader neuroscience community. Models of all styles and at all levels are welcome, from biophysically motivated realistic simulations of neurons and synapses to high-level abstract models of inference and decision making. While the journal is primarily focused on theoretically based and driven research, we welcome experimental studies that validate and test theoretical conclusions. Also: comp neuro
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