Influence of device configuration and noise on a machine learning predictor for the selection of nanoparticle small-angle X-ray scattering models.

IF 1.9 4区 材料科学 Q3 CHEMISTRY, MULTIDISCIPLINARY Acta Crystallographica Section A: Foundations and Advances Pub Date : 2024-11-01 DOI:10.1107/S2053273324007988
Nicolas Monge, Massih Reza Amini, Alexis Deschamps
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Abstract

Small-angle X-ray scattering (SAXS) is a widely used method for nanoparticle characterization. A common approach to analysing nanoparticles in solution by SAXS involves fitting the curve using a parametric model that relates real-space parameters, such as nanoparticle size and electron density, to intensity values in reciprocal space. Selecting the optimal model is a crucial step in terms of analysis quality and can be time-consuming and complex. Several studies have proposed effective methods, based on machine learning, to automate the model selection step. Deploying these methods in software intended for both researchers and industry raises several issues. The diversity of SAXS instrumentation requires assessment of the robustness of these methods on data from various machine configurations, involving significant variations in the q-space ranges and highly variable signal-to-noise ratios (SNR) from one data set to another. In the case of laboratory instrumentation, data acquisition can be time-consuming and there is no universal criterion for defining an optimal acquisition time. This paper presents an approach that revisits the nanoparticle model selection method proposed by Monge et al. [Acta Cryst. (2024), A80, 202-212], evaluating and enhancing its robustness on data from device configurations not seen during training, by expanding the data set used for training. The influence of SNR on predictor robustness is then assessed, improved, and used to propose a stopping criterion for optimizing the trade-off between exposure time and data quality.

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设备配置和噪声对用于选择纳米粒子小角 X 射线散射模型的机器学习预测器的影响。
小角 X 射线散射(SAXS)是一种广泛应用的纳米粒子表征方法。利用 SAXS 分析溶液中纳米粒子的常用方法包括使用参数模型拟合曲线,该模型将实际空间参数(如纳米粒子尺寸和电子密度)与倒数空间的强度值联系起来。选择最佳模型是保证分析质量的关键步骤,可能既耗时又复杂。一些研究提出了基于机器学习的有效方法,以实现模型选择步骤的自动化。在面向研究人员和工业界的软件中部署这些方法会产生一些问题。SAXS 仪器的多样性要求对这些方法在不同机器配置数据上的稳健性进行评估,其中涉及 q 空间范围的显著变化,以及从一个数据集到另一个数据集的高度可变信噪比 (SNR)。就实验室仪器而言,数据采集可能非常耗时,而且没有通用的标准来定义最佳采集时间。本文介绍了一种重新审视 Monge 等人提出的纳米粒子模型选择方法的方法[Acta Cryst.然后评估、改进信噪比对预测器稳健性的影响,并提出一个停止标准,以优化曝光时间和数据质量之间的权衡。
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来源期刊
Acta Crystallographica Section A: Foundations and Advances
Acta Crystallographica Section A: Foundations and Advances CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
2.60
自引率
11.10%
发文量
419
期刊介绍: Acta Crystallographica Section A: Foundations and Advances publishes articles reporting advances in the theory and practice of all areas of crystallography in the broadest sense. As well as traditional crystallography, this includes nanocrystals, metacrystals, amorphous materials, quasicrystals, synchrotron and XFEL studies, coherent scattering, diffraction imaging, time-resolved studies and the structure of strain and defects in materials. The journal has two parts, a rapid-publication Advances section and the traditional Foundations section. Articles for the Advances section are of particularly high value and impact. They receive expedited treatment and may be highlighted by an accompanying scientific commentary article and a press release. Further details are given in the November 2013 Editorial. The central themes of the journal are, on the one hand, experimental and theoretical studies of the properties and arrangements of atoms, ions and molecules in condensed matter, periodic, quasiperiodic or amorphous, ideal or real, and, on the other, the theoretical and experimental aspects of the various methods to determine these properties and arrangements.
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Influence of device configuration and noise on a machine learning predictor for the selection of nanoparticle small-angle X-ray scattering models. An alternative method to the Takagi-Taupin equations for studying dark-field X-ray microscopy of deformed crystals. Structure of face-centred icosahedral quasicrystals with cluster close packing. Lattice symmetry relaxation as a cause for anisotropic line broadening and peak shift in powder diffraction. Instrumental broadening and the radial pair distribution function with 2D detectors.
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