Active DNA Demethylation Mediated by OsGADD45a2 Regulates Growth, Development, and Blast (Magnaporthe oryzea) Resistance in Rice.

IF 5.7 1区 农林科学 Q1 AGRICULTURE, MULTIDISCIPLINARY Journal of Agricultural and Food Chemistry Pub Date : 2024-10-28 DOI:10.1021/acs.jafc.4c06297
Ganghua Zhou, Nan Nan, Ning Li, Mengting Li, Ao Ma, Qixin Ye, Jie Wang, Zheng-Yi Xu
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Abstract

OsGADD45a1, a member of the growth arrest and DNA damage-inducible 45 (GADD45) family in rice, has a newly identified homologue, OsGADD45a2, which differs from OsGADD45a1 in only three amino acids. The role and function of the OsGADD45a2 in DNA demethylation are not well-understood and were investigated in this study. Osgadd45a2 mutants exhibited reduced height, shorter panicle length, fewer grains per panicle, and a lower seed setting rate compared with wild-type plants. Moreover, the results showed that OsGADD45a2 negatively regulates rice blast fungus resistance and exhibited high expression in various tissues. Using the 3000 Rice Genomes Project database, we identified four major haplotypes (each with over 100 cultivars) based on single-nucleotide polymorphisms in the coding sequence of OsGADD45a2. Among these, Hap4 was associated with a significantly greater plant height than Hap1-3, possibly due to a functional alteration of OsGADD45a2 linked to the SNP at position 2614993. In OsGADD45a2 overexpression lines, significant decreases in CG and CHG methylation levels were observed in protein-coding genes, leading to their upregulation. Overall, our findings indicate that OsGADD45a2 acts as a methylation regulator, mediating the expression of genes essential for plant growth and development and blast resistance.

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OsGADD45a2 介导的活性 DNA 去甲基化调控水稻的生长、发育和抗稻瘟病(Magnaporthe oryzea)能力。
OsGADD45a1是水稻生长停滞和DNA损伤诱导45(GADD45)家族的成员,它有一个新发现的同源物OsGADD45a2,与OsGADD45a1只有三个氨基酸的差异。OsGADD45a2 在 DNA 去甲基化过程中的作用和功能尚不清楚,本研究对其进行了研究。与野生型植株相比,Osgadd45a2 突变体表现出高度降低、圆锥花序长度缩短、每粒圆锥花序的籽粒数减少以及结籽率降低。此外,研究结果表明,OsGADD45a2负调控水稻对稻瘟病菌的抗性,并在不同组织中表现出高表达。利用 3000 水稻基因组计划数据库,我们根据 OsGADD45a2 编码序列中的单核苷酸多态性鉴定出了 4 个主要单倍型(每个单倍型有 100 多个栽培品种)。其中,Hap4 的株高明显高于 Hap1-3,这可能是由于 OsGADD45a2 的功能改变与 2614993 位的 SNP 有关。在OsGADD45a2过表达株系中,蛋白质编码基因的CG和CHG甲基化水平明显下降,导致其上调。总之,我们的研究结果表明,OsGADD45a2 是一种甲基化调节因子,介导植物生长发育和抗病性所必需基因的表达。
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来源期刊
Journal of Agricultural and Food Chemistry
Journal of Agricultural and Food Chemistry 农林科学-农业综合
CiteScore
9.90
自引率
8.20%
发文量
1375
审稿时长
2.3 months
期刊介绍: The Journal of Agricultural and Food Chemistry publishes high-quality, cutting edge original research representing complete studies and research advances dealing with the chemistry and biochemistry of agriculture and food. The Journal also encourages papers with chemistry and/or biochemistry as a major component combined with biological/sensory/nutritional/toxicological evaluation related to agriculture and/or food.
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