Temporal convolutional network on Raman shift for human osteoblast cells fingerprint Analysisa,b,c

Dario Morganti , Maria Giovanna Rizzo , Massimo Orazio Spata , Salvatore Guglielmino , Barbara Fazio , Sebastiano Battiato , Sabrina Conoci
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Abstract

The physiological state and biological characteristics of cells play a crucial role in the study of several biological mechanisms that are at the basis of the life. Raman spectroscopy, a powerful non-destructive technique, has shown promise in providing unique molecular fingerprints of cells based on their vibrational states. However, the high-dimensional and noisy nature of Raman spectra poses significant challenges in precise cell classification. In this study, we present a novel deep learning algorithm tailored for human cells fingerprint assignment through Raman shift analysis. The proposed deep learning framework harnesses the power of Temporal Convolutional Networks (TCN) to efficiently extract and process Raman spectra information. Leveraging a dataset of labeled Raman spectra, the model is trained to learn discriminative features that capture the subtle differences in cell composition and molecular structures in differential states. Additionally, the proposed model enables real-time cell fingerprint prediction, making it highly applicable for high-throughput analysis in large-scale experiments. Experimental results demonstrate a peak accuracy of 99 %, showcasing the effectiveness and precision of the approach. Overall, the developed deep learning algorithm offers a robust and efficient solution for cell fingerprint assignment through Raman shift analysis, opening new avenues for advancements in physiological and biochemical studies.
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用于人类成骨细胞指纹分析的拉曼移动时序卷积网络a,b,c
细胞的生理状态和生物特征在研究作为生命基础的多种生物机制方面发挥着至关重要的作用。拉曼光谱是一种强大的非破坏性技术,有望根据细胞的振动状态提供独特的分子指纹。然而,拉曼光谱的高维和噪声特性给精确的细胞分类带来了巨大挑战。在本研究中,我们提出了一种新型深度学习算法,通过拉曼位移分析为人类细胞指纹分配量身定制。所提出的深度学习框架利用时序卷积网络(TCN)的强大功能,有效地提取和处理拉曼光谱信息。利用标记的拉曼光谱数据集,该模型经过训练,可学习捕捉细胞组成和分子结构在不同状态下的细微差别的判别特征。此外,所提出的模型还能进行实时细胞指纹预测,因此非常适用于大规模实验中的高通量分析。实验结果表明,该方法的峰值准确率高达 99%,充分展示了该方法的有效性和精确性。总之,所开发的深度学习算法为通过拉曼位移分析进行细胞指纹分配提供了一种稳健而高效的解决方案,为生理和生化研究的进步开辟了新途径。
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来源期刊
Intelligence-based medicine
Intelligence-based medicine Health Informatics
CiteScore
5.00
自引率
0.00%
发文量
0
审稿时长
187 days
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