3D structural insights into the effect of N-glycosylation in human chitotriosidase variant G102S.

IF 2.8 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochimica et biophysica acta. General subjects Pub Date : 2024-11-07 DOI:10.1016/j.bbagen.2024.130730
Xiao Xu, Noriyoshi Manabe, Shiho Ohno, Sachiko Komatsu, Tsutomu Fujimura, Yoshiki Yamaguchi
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Abstract

Background: N-glycosylation is a key post-translational modification critical for protein function and stability. Chitotriosidase-1 (CHIT1), belonging to glycoside hydrolase family 18, is clinically utilized as a biomarker of Gaucher disease. A G102S variant is common in some populations, but the implications of this missense mutation on CHIT1 function and in disease pathology are unknown. We have investigated the effects of the G102S mutation on the N-glycosylation, structure, and activity of CHIT1.

Methods: Three recombinant CHIT1 proteins, wild-type (WT), G102S, and N100Q + G102S double mutants, were expressed, purified, and analyzed for glycosylation using SDS-PAGE, MALDI-MS, PNGase F treatment, and lectin blotting. NMR and LC-MS/MS were employed to characterize glycan structures. Enzymatic assays and molecular dynamics simulations were used to assess the effects of mutations on CHIT1 function and dynamics.

Results: The G102S mutation introduced a new N-glycosylation site at N100, confirmed by SDS-PAGE and MALDI-MS, and the composition of the N-glycan structures was verified by lectin blotting, NMR, and MS. Both G102S and N100Q + G102S proteins exhibited reduced catalytic efficiency compared to WT. Molecular dynamics simulations suggested that G102S mutation induces significant structural changes and reduces stability, particularly without N-glycan, likely impairing substrate binding and enzymatic activity.

Conclusion: Our findings indicate that the common G102S mutation affects the structure and function of CHIT1, partially by introducing a new N-glycosylation site. They provide a foundation for further research on the impact of N-glycosylation on its hydrolase activity and structural dynamics, with potential implications for understanding the role of CHIT1 in Gaucher disease.

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背景:N-糖基化是一种关键的翻译后修饰,对蛋白质的功能和稳定性至关重要。壳三糖苷酶-1(CHIT1)属于糖苷水解酶家族 18,在临床上被用作戈谢病的生物标志物。G102S 变异在一些人群中很常见,但这种错义突变对 CHIT1 功能和疾病病理的影响尚不清楚。我们研究了 G102S 突变对 CHIT1 的 N-糖基化、结构和活性的影响:方法:表达、纯化三种重组 CHIT1 蛋白,即野生型(WT)、G102S 和 N100Q + G102S 双突变体,并使用 SDS-PAGE、MALDI-MS、PNGase F 处理和凝集素印迹法进行糖基化分析。利用 NMR 和 LC-MS/MS 表征糖基结构。酶测定和分子动力学模拟用于评估突变对 CHIT1 功能和动力学的影响:SDS-PAGE和MALDI-MS证实了G102S突变在N100处引入了一个新的N-糖基化位点,凝集素印迹、NMR和MS验证了N-糖结构的组成。与 WT 蛋白相比,G102S 蛋白和 N100Q + G102S 蛋白的催化效率都有所降低。分子动力学模拟表明,G102S 突变诱导了显著的结构变化并降低了稳定性,尤其是在没有 N-糖的情况下,这可能会损害底物结合和酶活性:我们的研究结果表明,常见的 G102S 突变影响了 CHIT1 的结构和功能,部分原因是引入了一个新的 N-糖基化位点。这些研究为进一步研究 N-糖基化对其水解酶活性和结构动态的影响奠定了基础,对理解 CHIT1 在戈谢病中的作用具有潜在意义。
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来源期刊
Biochimica et biophysica acta. General subjects
Biochimica et biophysica acta. General subjects 生物-生化与分子生物学
CiteScore
6.40
自引率
0.00%
发文量
139
审稿时长
30 days
期刊介绍: BBA General Subjects accepts for submission either original, hypothesis-driven studies or reviews covering subjects in biochemistry and biophysics that are considered to have general interest for a wide audience. Manuscripts with interdisciplinary approaches are especially encouraged.
期刊最新文献
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