A novel prediction model for the prognosis of non-small cell lung cancer with clinical routine laboratory indicators: a machine learning approach.

IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS BMC Medical Informatics and Decision Making Pub Date : 2024-11-18 DOI:10.1186/s12911-024-02753-3
Yuli Wang, Na Mei, Ziyi Zhou, Yuan Fang, Jiacheng Lin, Fanchen Zhao, Zhihong Fang, Yan Li
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Abstract

Background: Lung cancer is characterized by high morbidity and mortality due to the lack of practical early diagnostic and prognostic tools. The present study uses machine learning algorithms to construct a clinical predictive model for non-small cell lung cancer (NSCLC) patients.

Methods: Laboratory indices of the NSCLC patients at their initial visit were collected for quality control and exploratory analysis. By comparing the levels of the above indices between the survival and death groups, the statistically significant indices were selected for subsequent machine learning modeling. Ten machine learning algorithms were then employed to develop the predictive models with survival and recurrence as outcomes, respectively. Moreover, regression models were constructed using the random survival forest algorithm by incorporating the survival time dimension. Finally, critical variables in the optimal model were screened based on the interpretable algorithms to build a decision tree to facilitate clinical application.

Results: 682 patients were enrolled according to the inclusion and exclusion criteria. The preliminary comparison results revealed that except for fast blood glucose, CD3+T cell proportion, NK cell proportion, and CA72-4, there were significant statistical differences in other tumor markers, inflammation, metabolism, and immune-related indices between the survival and death groups (p < 0.01). Subsequently, indices with statistical differences were incorporated into machine learning modeling and evaluation. The results showed that among the ten prognostic models constructed using survival status as the outcome, the neural network model obtained the best predictive performance, with accuracy, sensitivity, specificity, AUC, and precision values of 0.993, 0.987, 1.000, 0.994, and 1.000, respectively. The corresponding SHAP16 algorithm revealed that the top five variables in terms of importance were interleukin6 (IL-6), soluble interleukin2 receptor (sIL-2R), cholesterol, CEA, and Cy211, respectively. The random survival forest model also confirmed the critical role of CEA, sIL-2R, and IL-6 in predicting the prognosis of NSCLC patients. A decision tree model with seven cut-off points based on the above three indices was eventually built for clinical application.

Conclusion: The neural network model exhibited ideal predictive performance in the survival status of NSCLC patients, and the decision tree model constructed based on selected important variables was conducive to rapid bedside prognosis assessment and decision-making.

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利用临床常规实验室指标的非小细胞肺癌预后新型预测模型:一种机器学习方法。
背景:由于缺乏实用的早期诊断和预后工具,肺癌具有发病率和死亡率高的特点。本研究利用机器学习算法构建了非小细胞肺癌(NSCLC)患者的临床预测模型:方法:收集非小细胞肺癌患者初诊时的实验室指标,用于质量控制和探索性分析。通过比较生存组和死亡组之间的上述指标水平,选出具有统计学意义的指标用于随后的机器学习建模。随后,十种机器学习算法分别以存活和复发为结果建立预测模型。此外,利用随机生存森林算法,结合生存时间维度,构建了回归模型。最后,根据可解释算法筛选出最优模型中的关键变量,建立决策树,以方便临床应用:根据纳入和排除标准,共纳入 682 例患者。初步比较结果显示,除空腹血糖、CD3+T细胞比例、NK细胞比例和CA72-4外,生存组和死亡组在其他肿瘤标志物、炎症、代谢和免疫相关指标方面均有显著统计学差异(P 结论:神经网络模型具有理想的预测效果:神经网络模型对 NSCLC 患者的生存状况具有理想的预测性能,而基于所选重要变量构建的决策树模型有利于床旁快速评估预后和做出决策。
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来源期刊
CiteScore
7.20
自引率
5.70%
发文量
297
审稿时长
1 months
期刊介绍: BMC Medical Informatics and Decision Making is an open access journal publishing original peer-reviewed research articles in relation to the design, development, implementation, use, and evaluation of health information technologies and decision-making for human health.
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