{"title":"Dynamic evolution analysis and parameter optimization design of data-driven network infectious disease model","authors":"Linhe Zhu , Siyi Chen , Shuling Shen","doi":"10.1016/j.cmpb.2024.108509","DOIUrl":null,"url":null,"abstract":"<div><h3>Background and Objective:</h3><div>globalization and population mobility have increased the spread of infectious diseases and challenged public health security. This paper proposes a complex network epidemic model with nonlinear incidence rate and quadratic transmission. The Turing pattern, sensitivity analysis and parameter identification of the epidemic model under different network structures are studied;</div></div><div><h3>Methods:</h3><div>this paper discusses the Turing pattern of the model under different network structures, and identifies the key parameters of the model through sensitivity analysis. The influence of network dimension on the spread of infectious diseases on random networks is also explored, and the problems of minimum path and minimum cover set of random networks are further discussed. We also carry out parameter identification experiments, adopt gradient descent algorithm to realize heterogeneous spatial fitting pattern of red blood cell plasma and simulate the transmission path of <span><math><mrow><mi>C</mi><mi>O</mi><mi>V</mi><mi>I</mi><mi>D</mi></mrow></math></span>-19 through Markov chain Monte Carlo fitting experiment, verifying the effectiveness of the model;</div></div><div><h3>Results:</h3><div>the necessary conditions for Turing instability on homogeneous and heterogeneous networks are found. On the heterogeneous lattice network, we observe the special patterns of equal density population. Sensitivity analysis shows that the higher the infection rate, the more infected people. On random networks, the higher the dimension, the better the effect of suppressing the spread of infectious diseases. Through comparison experiment, it is found that gradient descent algorithm has the best performance in parameter identification experiments. Red blood cell plasma fitting experiment reveals the spatial density distribution of infection rate;</div></div><div><h3>Conclusions:</h3><div>this study provides theoretical support for the prevention and control of infectious diseases, and the complex network model can simulate the transmission process of infectious diseases more accurately. Sensitivity analysis and parameter identification experiments reveal the key influencing factors of propagation and the role of network structure. The effectiveness of the model is supported by actual data, which is helpful for the government health departments to formulate scientific prevention and control strategies.</div></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"258 ","pages":"Article 108509"},"PeriodicalIF":4.9000,"publicationDate":"2024-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260724005029","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0
Abstract
Background and Objective:
globalization and population mobility have increased the spread of infectious diseases and challenged public health security. This paper proposes a complex network epidemic model with nonlinear incidence rate and quadratic transmission. The Turing pattern, sensitivity analysis and parameter identification of the epidemic model under different network structures are studied;
Methods:
this paper discusses the Turing pattern of the model under different network structures, and identifies the key parameters of the model through sensitivity analysis. The influence of network dimension on the spread of infectious diseases on random networks is also explored, and the problems of minimum path and minimum cover set of random networks are further discussed. We also carry out parameter identification experiments, adopt gradient descent algorithm to realize heterogeneous spatial fitting pattern of red blood cell plasma and simulate the transmission path of -19 through Markov chain Monte Carlo fitting experiment, verifying the effectiveness of the model;
Results:
the necessary conditions for Turing instability on homogeneous and heterogeneous networks are found. On the heterogeneous lattice network, we observe the special patterns of equal density population. Sensitivity analysis shows that the higher the infection rate, the more infected people. On random networks, the higher the dimension, the better the effect of suppressing the spread of infectious diseases. Through comparison experiment, it is found that gradient descent algorithm has the best performance in parameter identification experiments. Red blood cell plasma fitting experiment reveals the spatial density distribution of infection rate;
Conclusions:
this study provides theoretical support for the prevention and control of infectious diseases, and the complex network model can simulate the transmission process of infectious diseases more accurately. Sensitivity analysis and parameter identification experiments reveal the key influencing factors of propagation and the role of network structure. The effectiveness of the model is supported by actual data, which is helpful for the government health departments to formulate scientific prevention and control strategies.
期刊介绍:
To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine.
Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.