Whole-genome sequencing to identify rare variants in East Asian patients with dementia with Lewy bodies.

IF 4.1 Q2 GERIATRICS & GERONTOLOGY npj aging Pub Date : 2024-11-21 DOI:10.1038/s41514-024-00180-2
Tetsuaki Kimura, Kosuke Fujita, Takashi Sakurai, Shumpei Niida, Kouichi Ozaki, Daichi Shigemizu
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Abstract

Dementia with Lewy bodies (DLB) is the second most common form of age-related dementia, following Alzheimer's disease (AD). DLB is associated with a worse prognosis than AD and is characterized by a more rapid progression of cognitive impairment and a poorer quality of life. In addition, the pathogenesis of DLB is less understood than that of AD, and only three genes-SNCA (α-synuclein), APOE (apolipoprotein E), and GBA1 (glucosylceramidase beta 1)-have been convincingly demonstrated to be associated with DLB. In this study, we utilized whole-genome sequencing data from 1744 Japanese individuals, comprising 45 DLB patients and 1699 cognitively normal older adults, aiming to identify new genes associated with DLB. Our genome-wide association studies of genes with potentially deleterious mutations identified the CDH23 gene as being associated with DLB, reaching a Bonferroni-corrected significance (P = 7.43 × 10-4). The gene contained three ethnicity-specific heterozygous missense variants (rs181275139, rs563688802, and rs137937502). CDH23 has been linked to deafness syndromes, and DLB patients carrying these mutations displayed symptoms of subjective hearing loss, suggesting a potential association between DLB onset and auditory impairment. Additionally, we explored human leukocyte antigen (HLA) genotypes associated with DLB but found no significant associations. This result suggests that the pathology of DLB differs from that of Parkinson's disease, which has been reported to have an association with HLA. Although a limitation of this study is the lack of replication of our findings, which require further validation in independent cohorts, our study enhances the understanding of the etiology of DLB in the Japanese population and provides new insights into the underlying mechanisms of its pathogenesis.

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通过全基因组测序鉴定东亚路易体痴呆症患者的罕见变异。
路易体痴呆(DLB)是继阿尔茨海默病(AD)之后第二种最常见的老年性痴呆。与阿尔茨海默病相比,路易体痴呆症的预后更差,其特点是认知功能障碍进展更快,生活质量更差。此外,DLB 的发病机制不如 AD 那么清楚,而且只有三个基因--SNCA(α-突触核蛋白)、APOE(脂蛋白 E)和 GBA1(葡萄糖甘油糖苷酶 beta 1)--已被令人信服地证明与 DLB 相关。在本研究中,我们利用了来自 1744 名日本人(包括 45 名 DLB 患者和 1699 名认知正常的老年人)的全基因组测序数据,旨在找出与 DLB 相关的新基因。我们对存在潜在有害突变的基因进行了全基因组关联研究,发现CDH23基因与DLB相关,达到了Bonferroni校正显著性(P = 7.43 × 10-4)。该基因包含三个种族特异性杂合错义变异(rs181275139、rs563688802 和 rs137937502)。CDH23 与耳聋综合征有关,携带这些突变的 DLB 患者表现出主观听力损失的症状,这表明 DLB 发病与听觉障碍之间可能存在关联。此外,我们还研究了与 DLB 相关的人类白细胞抗原(HLA)基因型,但没有发现明显的关联。这一结果表明,DLB 的病理与帕金森病不同,帕金森病据报道与 HLA 有关。虽然本研究的局限性在于我们的发现缺乏复制性,需要在独立的队列中进一步验证,但我们的研究加深了对日本人群中 DLB 病因的了解,并为其发病机制提供了新的见解。
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来源期刊
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Aging modulates the impact of cognitive interference subtypes on dynamic connectivity across a distributed motor network. Emerging insights in senescence: pathways from preclinical models to therapeutic innovations. Whole-genome sequencing to identify rare variants in East Asian patients with dementia with Lewy bodies. Genetic variants associated with longevity in long-living Indians. Leonard Hayflick (1928-2024) - obituary.
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