Modulating Liposome Surface Charge for Maximized ATP Regeneration in Synthetic Nanovesicles.

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS ACS Synthetic Biology Pub Date : 2024-11-26 DOI:10.1021/acssynbio.4c00487
Sabina Deutschmann, Stefan Theodore Täuber, Lukas Rimle, Olivier Biner, Martin Schori, Ana-Marija Stanic, Christoph von Ballmoos
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Abstract

In vitro reconstructed minimal respiratory chains are powerful tools to investigate molecular interactions between the different enzyme components and how they are influenced by their environment. One such system is the coreconstitution of the terminal cytochrome bo3 oxidase and the ATP synthase from Escherichia coli into liposomes, where the ATP synthase activity is driven through a proton motive force (pmf) created by the bo3 oxidase. The proton pumping activity of the bo3 oxidase is initiated using the artificial electron mediator short-chain ubiquinone and electron source DTT. Here, we extend this system and use either complex II or NDH-2 and succinate or NADH, respectively, as electron entry points employing the natural long-chain ubiquinone Q8 or Q10. By testing different lipid compositions, we identify that negatively charged lipids are a prerequisite to allow effective NDH-2 activity. Simultaneously, negatively charged lipids decrease the overall pmf formation and ATP synthesis rates. We find that orientation of the bo3 oxidase in liposomal membranes is governed by electrostatic interactions between enzyme and membrane surface, where positively charged lipids yield the desired bo3 oxidase orientation but hinder reduction of the quinone pool by NDH-2. To overcome this conundrum, we exploit ionizable lipids, which are either neutral or positively charged depending on the pH value. We first coreconstituted bo3 oxidase and ATP synthase into temporarily positively charged liposomes, followed by fusion with negatively charged empty liposomes at low pH. An increase of the pH to physiological values renders these proteoliposomes overall negatively charged, making them compatible with quinone reduction via NDH-2. Using this strategy, we not only succeeded in orienting the bo3 oxidase essentially unidirectionally into liposomes but also found up to 3-fold increased ATP synthesis rates through the usage of natural, long-chain quinones in combination with the substrate NADH compared to the synthetic electron donor/mediator pair.

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调节脂质体表面电荷,使合成纳米囊泡中的 ATP 再生最大化。
体外重建的最小呼吸链是研究不同酶成分之间的分子相互作用以及它们如何受环境影响的有力工具。其中一个系统是将来自大肠杆菌的末端细胞色素 bo3 氧化酶和 ATP 合成酶的核心合成到脂质体中,通过 bo3 氧化酶产生的质子动力(pmf)来驱动 ATP 合成酶的活性。bo3 氧化酶的质子泵活动是利用人工电子介质短链泛醌和电子源 DTT 启动的。在这里,我们扩展了这一系统,分别使用复合体 II 或 NDH-2 以及琥珀酸或 NADH 作为电子入口,并使用天然长链泛醌 Q8 或 Q10。通过测试不同的脂质成分,我们发现带负电荷的脂质是 NDH-2 有效发挥作用的先决条件。同时,带负电荷的脂质降低了整个 pmf 的形成和 ATP 合成率。我们发现,脂质体膜中 bo3 氧化酶的取向受酶与膜表面之间静电相互作用的影响,带正电荷的脂质能产生理想的 bo3 氧化酶取向,但会阻碍 NDH-2 还原醌池。为了克服这一难题,我们利用了可电离脂质,根据 pH 值的不同,这些脂质要么带中性电荷,要么带正电荷。我们首先在暂时带正电荷的脂质体中核构 bo3 氧化酶和 ATP 合成酶,然后在低 pH 值下与带负电荷的空脂质体融合。当 pH 值升高到生理值时,这些蛋白脂质体就会整体带负电,从而使它们能够通过 NDH-2 进行醌还原。利用这种策略,我们不仅成功地将 bo3 氧化酶基本上单向导入脂质体,而且还发现通过使用天然长链醌与底物 NADH 结合,ATP 合成率比合成电子供体/中介对提高了 3 倍。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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