Exploring the Molecular Mechanisms underlying SADI-S Improves Glucose Metabolism in Type 2 Diabetic Rats through Liver Transcriptomics and Proteomics Analysis

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Journal of Proteome Research Pub Date : 2024-11-05 DOI:10.1021/acs.jproteome.4c0053210.1021/acs.jproteome.4c00532
Lun Wang, Zhengfu Chen, Subo Ma and Tao Jiang*, 
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Abstract

Metabolic surgery could improve or even reverse type 2 diabetes mellitus (T2DM). Single-anastomosis duodenal-ileal bypass with sleeve gastrectomy (SADI-S) is one of the most effective metabolic surgeries for T2DM. However, the molecular mechanisms behind the SADI-S-induced T2DM improvement are not fully understood.Here,T2DM rats received SADI-S and were sacrificed after 8 weeks; the controls received sham surgery; Liver tissues were collected for transcriptomics and proteomics analysis to identify differentially expressed genes (DEGs) and proteins (DEPs). Parallel reaction monitoring (PRM) was performed to validate the accuracy of the proteomics results.SADI-S significantly improved glucose metabolism in T2DM rats.A total of 120 genes/proteins(e.g., phosphoenolpyruvate carboxykinase (Pck1) and pyruvate kinase (Pklr)) exhibited consistent expression trends at both mRNA and protein levels. Among the upregulated genes/proteins involved in glucose metabolic pathways, enrichment was observed in pathways such as the pyruvate metabolic pathway, insulin signaling pathway, glycolysis/gluconeogenesis biological processes, glucagon signaling pathway, and AMPK signaling pathway. Downregulated genes/proteins were enriched in the pyruvate metabolic pathway. The above-mentioned signaling pathways are implicated in glucose metabolism, suggesting a potential mechanism for SADI-S-mediated alleviation of T2DM. The PRM validation results indicated that all selected proteins showed consistent trends between PRM and proteomics data. This consistency suggests the reliability of the proteomics results.

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通过肝脏转录组学和蛋白质组学分析探索SADI-S改善2型糖尿病大鼠葡萄糖代谢的分子机制
代谢手术可以改善甚至逆转2型糖尿病(T2DM)。单吻合术十二指肠回肠旁路加袖胃切除术(SADI-S)是治疗T2DM最有效的代谢手术之一。然而,sadi - s诱导T2DM改善的分子机制尚不完全清楚。T2DM大鼠接受SADI-S治疗,8周后处死;对照组接受假手术;收集肝组织进行转录组学和蛋白质组学分析,鉴定差异表达基因(DEGs)和差异表达蛋白(DEPs)。采用平行反应监测(PRM)验证蛋白质组学结果的准确性。SADI-S显著改善T2DM大鼠糖代谢。共有120个基因/蛋白(如:磷酸烯醇丙酮酸羧激酶(Pck1)和丙酮酸激酶(pkr)在mRNA和蛋白水平上表达趋势一致。在糖代谢通路相关的上调基因/蛋白中,丙酮酸代谢通路、胰岛素信号通路、糖酵解/糖异生生物过程、胰高血糖素信号通路、AMPK信号通路等通路均有富集。下调的基因/蛋白在丙酮酸代谢途径中富集。上述信号通路与葡萄糖代谢有关,提示sadi - s介导的T2DM缓解的潜在机制。PRM验证结果表明,所有选择的蛋白质在PRM和蛋白质组学数据之间表现出一致的趋势。这种一致性表明蛋白质组学结果的可靠性。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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