Toward a Generalizable Machine-Learned Potential for Metal–Organic Frameworks

IF 16 1区 材料科学 Q1 CHEMISTRY, MULTIDISCIPLINARY ACS Nano Pub Date : 2024-12-31 DOI:10.1021/acsnano.4c12369
Yifei Yue, Saad Aldin Mohamed, N. Duane Loh, Jianwen Jiang
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Abstract

Machine-learned potentials (MLPs) have transformed the field of molecular simulations by scaling “quantum-accurate” potentials to linear time complexity. While they provide more accurate reproduction of physical properties as compared to empirical force fields, it is still computationally costly to generate their training data sets from ab initio calculations. Despite the emergence of foundational or general MLPs for organic molecules and dense materials, it is unexplored if one general MLP can be effectively developed for a wide variety of nanoporous metal–organic frameworks (MOFs) with different chemical moieties and geometric properties. Herein, by leveraging upon data-efficient equivariant MLPs, we demonstrate the possibility of developing a general MLP for nearly 3000 Zn-based MOFs. After curating a training data set comprising augmented MOF structures generated from density functional theory optimization, we validate the reliability of the general MLP in predicting accurate forces and energies when evaluated on a test set with chemically distinct MOF structures. Despite incurring slightly higher errors on structures containing rare chemical moieties, the general MLP can reliably reproduce physical (e.g., vibrational, thermodynamic, and mechanical) properties for a large sample of Zn-based MOFs. Crucially, by developing one MLP for many MOFs, the computational cost of high-throughput screening is potentially reduced by a few orders of magnitude. This enables us to predict quantum-accurate properties for notable Zn-MOFs that were previously uninvestigated via expensive theoretical calculations. To facilitate computational discovery among other families of complex chemical structures, we provide our data set and codes in the public Zenodo repository.

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面向金属有机框架的可推广机器学习潜力
机器学习势(MLPs)通过将“量子精确”势缩放为线性时间复杂度,改变了分子模拟领域。虽然与经验力场相比,它们提供了更准确的物理特性再现,但从从头计算中生成训练数据集的计算成本仍然很高。尽管出现了用于有机分子和致密材料的基础或通用MLP,但是否可以有效地开发出具有不同化学成分和几何性质的各种纳米多孔金属-有机框架(mof)的通用MLP尚未得到探索。在此,通过利用数据高效的等变MLP,我们展示了为近3000个zn基mof开发通用MLP的可能性。在编制了由密度泛函理论优化生成的增强MOF结构的训练数据集之后,我们验证了一般MLP在预测准确的力和能量方面的可靠性,并在具有化学不同MOF结构的测试集上进行了评估。尽管在含有稀有化学成分的结构上产生略高的误差,但一般MLP可以可靠地再现大量zn基mof样品的物理(例如振动、热力学和机械)特性。至关重要的是,通过为许多mof开发一个MLP,高通量筛选的计算成本可能会降低几个数量级。这使我们能够通过昂贵的理论计算预测以前未研究过的显著zn - mof的量子精确性质。为了方便在复杂化学结构的其他家族中进行计算发现,我们在公共Zenodo存储库中提供了我们的数据集和代码。
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来源期刊
ACS Nano
ACS Nano 工程技术-材料科学:综合
CiteScore
26.00
自引率
4.10%
发文量
1627
审稿时长
1.7 months
期刊介绍: ACS Nano, published monthly, serves as an international forum for comprehensive articles on nanoscience and nanotechnology research at the intersections of chemistry, biology, materials science, physics, and engineering. The journal fosters communication among scientists in these communities, facilitating collaboration, new research opportunities, and advancements through discoveries. ACS Nano covers synthesis, assembly, characterization, theory, and simulation of nanostructures, nanobiotechnology, nanofabrication, methods and tools for nanoscience and nanotechnology, and self- and directed-assembly. Alongside original research articles, it offers thorough reviews, perspectives on cutting-edge research, and discussions envisioning the future of nanoscience and nanotechnology.
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