Vladyslav Gapyak, Corinna Erika Rentschler, Thomas März, Andreas Weinmann
{"title":"Anℓ1-plug-and-play approach for MPI using a zero shot denoiser with evaluation on the 3D open MPI dataset.","authors":"Vladyslav Gapyak, Corinna Erika Rentschler, Thomas März, Andreas Weinmann","doi":"10.1088/1361-6560/ada5a1","DOIUrl":null,"url":null,"abstract":"<p><p><i>Objective.</i>Magnetic particle imaging (MPI) is an emerging medical imaging modality which has gained increasing interest in recent years. Among the benefits of MPI are its high temporal resolution, and that the technique does not expose the specimen to any kind of ionizing radiation. It is based on the non-linear response of magnetic nanoparticles to an applied magnetic field. From the electric signal measured in receive coils, the particle concentration has to be reconstructed. Due to the ill-posedness of the reconstruction problem, various regularization methods have been proposed for reconstruction ranging from early stopping methods, via classical Tikhonov regularization and iterative methods to modern machine learning approaches. In this work, we contribute to the latter class: we propose a Plug-and-Play approach based on a generic zero-shot denoiser with anℓ1-prior.<i>Approach.</i>We validate the reconstruction parameters of the method on a hybrid dataset and compare it with the baseline Tikhonov, ART, DIP and the previous PP-MPI, which is a Plug-and-Play method with denoiser trained on MPI-friendly data.<i>Main results.</i>We derive a Plug-and-Play reconstruction method based on a generic zero-shot denoiser. Addressing (hyper)parameter selection, we perform an extended parameter search on a hybrid validation dataset we produced and apply the derived parameters for reconstruction on the 3D Open MPI Dataset. We offer a quantitative and qualitative evaluation of the zero-shot Plug-and-Play approach on the 3D Open MPI dataset with the validated parameters. Moreover, we show the quality of the approach with different levels of preprocessing of the data.<i>Significance.</i>The proposed method employs a zero-shot denoiser which has not been trained for the MPI reconstruction task and therefore saves the cost for training. Moreover, it offers a method that can be potentially applied in future MPI contexts.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.3000,"publicationDate":"2025-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physics in medicine and biology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1088/1361-6560/ada5a1","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Objective.Magnetic particle imaging (MPI) is an emerging medical imaging modality which has gained increasing interest in recent years. Among the benefits of MPI are its high temporal resolution, and that the technique does not expose the specimen to any kind of ionizing radiation. It is based on the non-linear response of magnetic nanoparticles to an applied magnetic field. From the electric signal measured in receive coils, the particle concentration has to be reconstructed. Due to the ill-posedness of the reconstruction problem, various regularization methods have been proposed for reconstruction ranging from early stopping methods, via classical Tikhonov regularization and iterative methods to modern machine learning approaches. In this work, we contribute to the latter class: we propose a Plug-and-Play approach based on a generic zero-shot denoiser with anℓ1-prior.Approach.We validate the reconstruction parameters of the method on a hybrid dataset and compare it with the baseline Tikhonov, ART, DIP and the previous PP-MPI, which is a Plug-and-Play method with denoiser trained on MPI-friendly data.Main results.We derive a Plug-and-Play reconstruction method based on a generic zero-shot denoiser. Addressing (hyper)parameter selection, we perform an extended parameter search on a hybrid validation dataset we produced and apply the derived parameters for reconstruction on the 3D Open MPI Dataset. We offer a quantitative and qualitative evaluation of the zero-shot Plug-and-Play approach on the 3D Open MPI dataset with the validated parameters. Moreover, we show the quality of the approach with different levels of preprocessing of the data.Significance.The proposed method employs a zero-shot denoiser which has not been trained for the MPI reconstruction task and therefore saves the cost for training. Moreover, it offers a method that can be potentially applied in future MPI contexts.
期刊介绍:
The development and application of theoretical, computational and experimental physics to medicine, physiology and biology. Topics covered are: therapy physics (including ionizing and non-ionizing radiation); biomedical imaging (e.g. x-ray, magnetic resonance, ultrasound, optical and nuclear imaging); image-guided interventions; image reconstruction and analysis (including kinetic modelling); artificial intelligence in biomedical physics and analysis; nanoparticles in imaging and therapy; radiobiology; radiation protection and patient dose monitoring; radiation dosimetry