Integrating LC-MS/MS and In Silico Methods to Uncover Bioactive Compounds with Lipase Inhibitory Potential in the Antarctic Moss Warnstorfia fontinaliopsis.

IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Applied Biochemistry and Biotechnology Pub Date : 2025-01-10 DOI:10.1007/s12010-024-05139-3
Hirotake Yamaguchi, Ryoichi Yamada, Kristina Lama, Ui Joung Youn, Jun Hyuck Lee, Tae-Jin Oh
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Abstract

Antarctic organisms are known for producing unique secondary metabolites, and this study specifically focuses on the less-explored metabolites of the moss Warnstorfia fontinaliopsis. To evaluate their potential bioactivity, we extracted secondary metabolites using four different solvents and identified significant lipase inhibitory activity in the methanol extract. Non-targeted metabolomic analysis using liquid chromatography-tandem mass spectrometry (LC-MS/MS) on this extract predicted the presence of 12 compounds, including several not previously reported in mosses. To gain insights into their enzyme inhibitory activity, the binding affinities of these candidate compounds to lipase were evaluated through in silico molecular docking. Further validation by molecular dynamics (MD) simulations revealed that hyocholic acid and pheophorbide A form stable complexes with human pancreatic lipase (HPL). Based on these results, targeted fractionation experiments were performed, yielding eight fractions. Among these, Fractions 4 and 6, which are assumed to contain those compounds, exhibited higher lipase inhibitory activity compared to the crude extract. Additionally, pharmacokinetic properties of those compounds were analyzed using SwissADME and Molinspiration calculations, suggesting their potential as drug candidates. This study establishes a promising methodology for identifying rare bioactive compounds of low abundance in underexplored natural resources by combining LC-MS/MS analysis with molecular docking. These findings also provide new insights into the chemical ecology of Antarctic mosses and their potential applications in pharmaceutical development.

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结合LC-MS/MS和In Silico方法揭示南极苔藓Warnstorfia fontinaliopsis中具有脂肪酶抑制潜力的生物活性化合物。
南极生物以产生独特的次生代谢物而闻名,本研究特别关注较少探索的苔藓Warnstorfia fontinaliopsis的代谢物。为了评估其潜在的生物活性,我们用四种不同的溶剂提取了次生代谢物,并在甲醇提取物中发现了显著的脂肪酶抑制活性。利用液相色谱-串联质谱(LC-MS/MS)对该提取物进行非靶向代谢组学分析,预测了12种化合物的存在,其中包括一些以前未在苔藓中报道的化合物。为了深入了解它们的酶抑制活性,通过硅分子对接评估了这些候选化合物与脂肪酶的结合亲和力。通过分子动力学(MD)模拟进一步验证表明,胆酸和磷酸酯A与人胰脂肪酶(HPL)形成稳定的配合物。根据这些结果,进行了针对性的分馏实验,得到了8个馏分。其中,假设含有这些化合物的馏分4和馏分6与粗提取物相比,表现出更高的脂肪酶抑制活性。此外,使用SwissADME和Molinspiration计算分析了这些化合物的药代动力学特性,表明它们作为候选药物的潜力。本研究建立了一种将LC-MS/MS分析与分子对接相结合的方法,用于鉴定未开发自然资源中低丰度的稀有生物活性化合物。这些发现也为了解南极苔藓的化学生态学及其在药物开发中的潜在应用提供了新的见解。
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来源期刊
Applied Biochemistry and Biotechnology
Applied Biochemistry and Biotechnology 工程技术-生化与分子生物学
CiteScore
5.70
自引率
6.70%
发文量
460
审稿时长
5.3 months
期刊介绍: This journal is devoted to publishing the highest quality innovative papers in the fields of biochemistry and biotechnology. The typical focus of the journal is to report applications of novel scientific and technological breakthroughs, as well as technological subjects that are still in the proof-of-concept stage. Applied Biochemistry and Biotechnology provides a forum for case studies and practical concepts of biotechnology, utilization, including controls, statistical data analysis, problem descriptions unique to a particular application, and bioprocess economic analyses. The journal publishes reviews deemed of interest to readers, as well as book reviews, meeting and symposia notices, and news items relating to biotechnology in both the industrial and academic communities. In addition, Applied Biochemistry and Biotechnology often publishes lists of patents and publications of special interest to readers.
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