Cost-Reference Particle Filter-Based Method for Constructing Effective Brain Networks: Application in Optically Pumped Magnetometer Magnetoencephalography.

IF 3.7 3区 医学 Q2 ENGINEERING, BIOMEDICAL Bioengineering Pub Date : 2024-12-12 DOI:10.3390/bioengineering11121258
Yuyu Ma, Xiaoyu Liang, Huanqi Wu, Hao Lu, Yong Li, Changzeng Liu, Yang Gao, Min Xiang, Dexin Yu, Xiaolin Ning
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Abstract

Optically pumped magnetometer magnetoencephalography (OPM-MEG) represents a novel method for recording neural signals in the brain, offering the potential to measure critical neuroimaging characteristics such as effective brain networks. Effective brain networks describe the causal relationships and information flow between brain regions. In constructing effective brain networks using Granger causality, the noise in the multivariate autoregressive model (MVAR) is typically assumed to follow a Gaussian distribution. However, in experimental measurements, the statistical characteristics of noise are difficult to ascertain. In this paper, a Granger causality method based on a cost-reference particle filter (CRPF) is proposed for constructing effective brain networks under unknown noise conditions. Simulation results show that the average estimation errors of the MVAR model coefficients using the CRPF method are reduced by 53.4% and 82.4% compared to the Kalman filter (KF) and maximum correntropy filter (MCF) under Gaussian noise, respectively. The CRPF method reduces the average estimation errors by 88.1% and 85.8% compared to the MCF under alpha-stable distribution noise and the KF method under pink noise conditions, respectively. In an experiment, the CRPF method recoversthe latent characteristics of effective connectivity of benchmark somatosensory stimulation data in rats, human finger movement, and auditory oddball paradigms measured using OPM-MEG, which is in excellent agreement with known physiology. The simulation and experimental results demonstrate the effectiveness of the proposed algorithm and OPM-MEG for measuring effective brain networks.

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基于成本参考粒子滤波的有效脑网络构建方法:在光泵磁强计脑磁成像中的应用。
光泵磁强计脑磁图(OPM-MEG)代表了一种记录大脑神经信号的新方法,为测量关键的神经成像特征(如有效的大脑网络)提供了潜力。有效的大脑网络描述了大脑区域之间的因果关系和信息流。在利用格兰杰因果关系构建有效的脑网络时,通常假设多变量自回归模型(MVAR)中的噪声服从高斯分布。然而,在实验测量中,噪声的统计特性很难确定。本文提出了一种基于成本参考粒子滤波(CRPF)的Granger因果关系方法,用于在未知噪声条件下构建有效的脑网络。仿真结果表明,在高斯噪声下,与卡尔曼滤波(KF)和最大熵滤波(MCF)相比,CRPF方法对MVAR模型系数的平均估计误差分别降低了53.4%和82.4%。与稳定分布噪声条件下的MCF方法和粉红噪声条件下的KF方法相比,CRPF方法的平均估计误差分别降低了88.1%和85.8%。在实验中,CRPF方法恢复了用OPM-MEG测量的大鼠基准体感刺激数据、人类手指运动和听觉怪异范式的有效连通性的潜在特征,这与已知生理学非常一致。仿真和实验结果验证了该算法和OPM-MEG测量有效脑网络的有效性。
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来源期刊
Bioengineering
Bioengineering Chemical Engineering-Bioengineering
CiteScore
4.00
自引率
8.70%
发文量
661
期刊介绍: Aims Bioengineering (ISSN 2306-5354) provides an advanced forum for the science and technology of bioengineering. It publishes original research papers, comprehensive reviews, communications and case reports. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. All aspects of bioengineering are welcomed from theoretical concepts to education and applications. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. There are, in addition, four key features of this Journal: ● We are introducing a new concept in scientific and technical publications “The Translational Case Report in Bioengineering”. It is a descriptive explanatory analysis of a transformative or translational event. Understanding that the goal of bioengineering scholarship is to advance towards a transformative or clinical solution to an identified transformative/clinical need, the translational case report is used to explore causation in order to find underlying principles that may guide other similar transformative/translational undertakings. ● Manuscripts regarding research proposals and research ideas will be particularly welcomed. ● Electronic files and software regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material. ● We also accept manuscripts communicating to a broader audience with regard to research projects financed with public funds. Scope ● Bionics and biological cybernetics: implantology; bio–abio interfaces ● Bioelectronics: wearable electronics; implantable electronics; “more than Moore” electronics; bioelectronics devices ● Bioprocess and biosystems engineering and applications: bioprocess design; biocatalysis; bioseparation and bioreactors; bioinformatics; bioenergy; etc. ● Biomolecular, cellular and tissue engineering and applications: tissue engineering; chromosome engineering; embryo engineering; cellular, molecular and synthetic biology; metabolic engineering; bio-nanotechnology; micro/nano technologies; genetic engineering; transgenic technology ● Biomedical engineering and applications: biomechatronics; biomedical electronics; biomechanics; biomaterials; biomimetics; biomedical diagnostics; biomedical therapy; biomedical devices; sensors and circuits; biomedical imaging and medical information systems; implants and regenerative medicine; neurotechnology; clinical engineering; rehabilitation engineering ● Biochemical engineering and applications: metabolic pathway engineering; modeling and simulation ● Translational bioengineering
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