Integration of clinical, pathological, radiological, and transcriptomic data improves prediction for first-line immunotherapy outcome in metastatic non-small cell lung cancer

IF 15.7 1区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Nature Communications Pub Date : 2025-01-12 DOI:10.1038/s41467-025-55847-5
Nicolas Captier, Marvin Lerousseau, Fanny Orlhac, Narinée Hovhannisyan-Baghdasarian, Marie Luporsi, Erwin Woff, Sarah Lagha, Paulette Salamoun Feghali, Christine Lonjou, Clément Beaulaton, Andrei Zinovyev, Hélène Salmon, Thomas Walter, Irène Buvat, Nicolas Girard, Emmanuel Barillot
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Abstract

Immunotherapy is improving the survival of patients with metastatic non-small cell lung cancer (NSCLC), yet reliable biomarkers are needed to identify responders prospectively and optimize patient care. In this study, we explore the benefits of multimodal approaches to predict immunotherapy outcome using multiple machine learning algorithms and integration strategies. We analyze baseline multimodal data from a cohort of 317 metastatic NSCLC patients treated with first-line immunotherapy, including positron emission tomography images, digitized pathological slides, bulk transcriptomic profiles, and clinical information. Testing multiple integration strategies, most of them yield multimodal models surpassing both the best unimodal models and established univariate biomarkers, such as PD-L1 expression. Additionally, several multimodal combinations demonstrate improved patient risk stratification compared to models built with routine clinical features only. Our study thus provides evidence of the superiority of multimodal over unimodal approaches, advocating for the collection of large multimodal NSCLC datasets to develop and validate robust and powerful immunotherapy biomarkers.

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临床、病理、放射学和转录组学数据的整合提高了对转移性非小细胞肺癌一线免疫治疗结果的预测
免疫治疗正在提高转移性非小细胞肺癌(NSCLC)患者的生存率,但需要可靠的生物标志物来前瞻性地识别应答者并优化患者护理。在这项研究中,我们探索了使用多种机器学习算法和集成策略来预测免疫治疗结果的多模式方法的好处。我们分析了317名接受一线免疫治疗的转移性非小细胞肺癌患者的基线多模式数据,包括正电子发射断层扫描图像、数字化病理切片、大量转录组谱和临床信息。测试多种整合策略,其中大多数产生的多模态模型超越了最好的单模态模型和已建立的单变量生物标志物,如PD-L1表达。此外,与仅使用常规临床特征构建的模型相比,几种多模式组合显示出改善的患者风险分层。因此,我们的研究提供了多模式优于单模式方法的证据,倡导收集大型多模式非小细胞肺癌数据集,以开发和验证稳健和强大的免疫治疗生物标志物。
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来源期刊
Nature Communications
Nature Communications Biological Science Disciplines-
CiteScore
24.90
自引率
2.40%
发文量
6928
审稿时长
3.7 months
期刊介绍: Nature Communications, an open-access journal, publishes high-quality research spanning all areas of the natural sciences. Papers featured in the journal showcase significant advances relevant to specialists in each respective field. With a 2-year impact factor of 16.6 (2022) and a median time of 8 days from submission to the first editorial decision, Nature Communications is committed to rapid dissemination of research findings. As a multidisciplinary journal, it welcomes contributions from biological, health, physical, chemical, Earth, social, mathematical, applied, and engineering sciences, aiming to highlight important breakthroughs within each domain.
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