Identification of Glucose-6-Phosphate Dehydrogenase (G6PD) Inhibitors by Cheminformatics Approach.

Q4 Biochemistry, Genetics and Molecular Biology Critical Reviews in Oncogenesis Pub Date : 2025-01-01 DOI:10.1615/CritRevOncog.2024056445
Srilatha Mundla, Madhu Sudhana Saddala
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引用次数: 0

Abstract

Glucose-6-phosphate dehydrogenase (G6PD) is an essential enzyme in the pentose phosphate pathway (PPP), a critical glucose metabolism pathway linked to cancer cell proliferation and metastasis. Inhibiting the PPP presents a promising approach to cancer treatment. The G6PD enzyme structure was obtained from the Protein Data Bank (PDB). The active site responsible for NADP+ binding was identified and used for structure-based pharmacophore design. This pharmacophore model was applied to the ZINC database to screen for small molecules. Molecular docking was accomplished using AutoDock Vina, and protein-ligand interactions were analyzed. Additionally, compounds were validated based on in silico ADMET properties to select the most promising candidates. A comprehensive screening and docking procedure identified several potential G6PD inhibitors. These compounds showed favorable interactions with the active site and met the criteria for optimal ADMET properties. The newly proposed G6PD inhibitors, with their potential to revolutionize cancer therapy, could serve as lead molecules for further research and development, inspiring the audience about the possibilities in cancer therapy.

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葡萄糖-6-磷酸脱氢酶(G6PD)抑制剂的化学信息学鉴定
葡萄糖-6-磷酸脱氢酶(glucose -6-phosphate dehydrogenase, G6PD)是戊糖磷酸途径(pentose phosphate pathway, PPP)中的一种必需酶,是与癌细胞增殖和转移相关的关键葡萄糖代谢途径。抑制PPP是一种很有希望的癌症治疗方法。从蛋白质数据库(Protein Data Bank, PDB)中获得G6PD酶的结构。确定了NADP+结合的活性位点,并将其用于基于结构的药效团设计。将该药效团模型应用于锌数据库中筛选小分子。利用AutoDock Vina完成分子对接,并分析蛋白质与配体的相互作用。此外,化合物基于硅ADMET特性进行验证,以选择最有希望的候选化合物。综合筛选和对接过程确定了几种潜在的G6PD抑制剂。这些化合物与活性位点表现出良好的相互作用,符合最佳ADMET性质的标准。新提出的G6PD抑制剂具有彻底改变癌症治疗的潜力,可以作为进一步研究和开发的先导分子,激发观众对癌症治疗的可能性。
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来源期刊
Critical Reviews in Oncogenesis
Critical Reviews in Oncogenesis Biochemistry, Genetics and Molecular Biology-Cancer Research
CiteScore
1.70
自引率
0.00%
发文量
17
期刊介绍: The journal is dedicated to extensive reviews, minireviews, and special theme issues on topics of current interest in basic and patient-oriented cancer research. The study of systems biology of cancer with its potential for molecular level diagnostics and treatment implies competence across the sciences and an increasing necessity for cancer researchers to understand both the technology and medicine. The journal allows readers to adapt a better understanding of various fields of molecular oncology. We welcome articles on basic biological mechanisms relevant to cancer such as DNA repair, cell cycle, apoptosis, angiogenesis, tumor immunology, etc.
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