QSAR Modeling of Pyridone Derivatives as α-amylase Inhibitors Using Chemical Descriptors and Machine Learning

IF 2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY ChemistrySelect Pub Date : 2025-01-28 DOI:10.1002/slct.202404214
Ya-Kun Zhang, Jian-Bo Tong, Ze-Lei Chang, Jing Yan, Xiao-Yu Xing, Yu-Lu Yang, Zhan Xue
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Abstract

Diabetes is a prevalent chronic metabolic disorder that affects the lives and health of millions of individuals annually. α-amylase, a key digestive enzyme, plays a critical role in carbohydrate digestion. Inhibition of α-amylase activity can effectively slow the digestion of carbohydrates, thereby aiding in the maintenance of stable blood glucose levels. Consequently, the identification and development of potent α-amylase inhibitors have become a significant research focus in diabetes management. This study employed a modeling approach based on chemical descriptors and machine learning techniques to systematically explore the relationship between the chemical structures of 32 pyridone derivatives and their α-amylase inhibitory activity. A robust and predictive quantitative structure-activity relationship (QSAR) model was developed through optimization with the Sparrow algorithm, Monte carlo domain applicability evaluation, and Y-randomization testing. Utilizing this model in conjunction with data from the ZINC15 database, 23 potential compounds exhibiting favorable activity were designed. Further evaluation through SwissADME performance predictions identified three compounds with high inhibitory potential. Molecular docking studies provided insights into the potential binding modes and mechanisms of action of these compounds. The results of this study offer valuable theoretical support for the development of pyridone derivatives as potential therapeutic agents for diabetes and provide novel insights for the discovery of α-amylase inhibitors.

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基于化学描述符和机器学习的吡啶酮衍生物α-淀粉酶抑制剂QSAR建模
糖尿病是一种普遍存在的慢性代谢紊乱,每年影响数百万人的生命和健康。α-淀粉酶是一种关键的消化酶,在碳水化合物的消化过程中起着关键作用。抑制α-淀粉酶活性可以有效减缓碳水化合物的消化,从而有助于维持稳定的血糖水平。因此,鉴定和开发有效的α-淀粉酶抑制剂已成为糖尿病治疗的重要研究热点。本研究采用基于化学描述符和机器学习技术的建模方法,系统地探讨了32种吡啶酮衍生物的化学结构与其α-淀粉酶抑制活性之间的关系。通过Sparrow算法优化、蒙特卡罗域适用性评估和y随机化检验,建立了稳健、可预测的定量构效关系(QSAR)模型。利用该模型结合ZINC15数据库的数据,设计了23个具有良好活性的潜在化合物。通过SwissADME性能预测进一步评估确定了三种具有高抑制潜力的化合物。分子对接研究提供了对这些化合物的潜在结合模式和作用机制的见解。本研究结果为吡啶酮衍生物作为潜在的糖尿病治疗药物的开发提供了有价值的理论支持,并为α-淀粉酶抑制剂的发现提供了新的见解。
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来源期刊
ChemistrySelect
ChemistrySelect Chemistry-General Chemistry
CiteScore
3.30
自引率
4.80%
发文量
1809
审稿时长
1.6 months
期刊介绍: ChemistrySelect is the latest journal from ChemPubSoc Europe and Wiley-VCH. It offers researchers a quality society-owned journal in which to publish their work in all areas of chemistry. Manuscripts are evaluated by active researchers to ensure they add meaningfully to the scientific literature, and those accepted are processed quickly to ensure rapid online publication.
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