Fully automated segmentation of brain and scalp blood vessels on multi-parametric magnetic resonance imaging using multi-view cascaded networks

IF 4.8 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer methods and programs in biomedicine Pub Date : 2025-03-01 Epub Date: 2025-01-02 DOI:10.1016/j.cmpb.2025.108584
Songxiong Wu , Zilong Huang , Mingyu Wang , Ping Zeng , Biwen Tan , Panying Wang , Bin Huang , Naiwen Zhang , Nashan Wu , Ruodai Wu , Yong Chen , Guangyao Wu , Fuyong Chen , Jian Zhang , Bingsheng Huang
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Abstract

Background and Objective

Neurosurgical navigation is a critical element of brain surgery, and accurate segmentation of brain and scalp blood vessels is crucial for surgical planning and treatment. However, conventional methods for segmenting blood vessels based on statistical or thresholding techniques have limitations. In recent years, deep learning-based methods have emerged as a promising solution for blood vessel segmentation, but the segmentation of small blood vessels and scalp blood vessels remains challenging. This study aimed to explore a solution to overcoming the challenges.

Methods

This study proposes a multi-view cascaded deep learning network (MVPCNet) that combines multiple refinements, including multi-view learning, multi-parameter input, and a multi-view ensemble module. We evaluated the proposed method on a dataset of 155 patients, which included annotations for brain and scalp blood vessels. Five-fold cross-validation was conducted on the dataset to assess the performance of the network.

Results

Ablation experiments showed that the proposed refinements in MVPCNet significantly improved the segmentation of small blood and low-contrast vessel performance, which segmented scalp blood vessels from the original images, increasing the Dice and the 95 % Hausdorf distance (HD), from 0.865 to 0.922 and from 1.28 mm to 0.47 mm, respectively, compared to the baseline model.

Conclusions

The proposed method in this study provided a fully automated and accurate segmentation of brain and scalp blood vessels, which is essential for neurosurgical navigation and has potential for clinical applications.
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基于多视图级联网络的多参数磁共振成像脑和头皮血管全自动分割
背景与目的神经外科导航是脑外科手术的重要组成部分,准确分割脑和头皮血管对手术计划和治疗至关重要。然而,传统的基于统计或阈值技术的血管分割方法有局限性。近年来,基于深度学习的方法已经成为血管分割的一种很有前途的解决方案,但小血管和头皮血管的分割仍然具有挑战性。本研究旨在探索克服这些挑战的解决方案。方法提出了一种多视图级联深度学习网络(MVPCNet),该网络结合了多种改进,包括多视图学习、多参数输入和多视图集成模块。我们对155名患者的数据集进行了评估,其中包括大脑和头皮血管的注释。对数据集进行了五次交叉验证,以评估网络的性能。结果消融实验表明,MVPCNet中提出的改进方法显著提高了小血管和低对比度血管的分割性能,从原始图像中分割出头皮血管,与基线模型相比,Dice和95% Hausdorf距离(HD)分别从0.865提高到0.922和从1.28 mm提高到0.47 mm。结论该方法可实现全自动、准确的脑和头皮血管分割,对神经外科导航具有重要意义,具有潜在的临床应用价值。
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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